Analysis of Ligand-Protein Contacts in PDB entry:
9L3D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 74 ligands in PDB entry 9L3D. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 10
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
D
6 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
D
7 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
D
8 11ALPHA-D-MANNOPYRANOSE
lig 15
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 18
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 20
MAN
E
6 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
E
7 11ALPHA-D-MANNOPYRANOSE
lig 22
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 25
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 26
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 27
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 28
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 29
MAN
F
8 11ALPHA-D-MANNOPYRANOSE
lig 30
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 33
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 34
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 35
MAN
G
6 11ALPHA-D-MANNOPYRANOSE
lig 36
MAN
G
7 11ALPHA-D-MANNOPYRANOSE
lig 37
MAN
G
8 11ALPHA-D-MANNOPYRANOSE
lig 38
MAN
G
9 11ALPHA-D-MANNOPYRANOSE
lig 39
MAN
G
10 11ALPHA-D-MANNOPYRANOSE
lig 40
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 43
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 44
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 45
MAN
H
6 11ALPHA-D-MANNOPYRANOSE
lig 46
MAN
H
7 11ALPHA-D-MANNOPYRANOSE
lig 47
MAN
H
8 11ALPHA-D-MANNOPYRANOSE
lig 48
MAN
H
9 11ALPHA-D-MANNOPYRANOSE
lig 49
MAN
H
10 11ALPHA-D-MANNOPYRANOSE
lig 50
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
MAN
A
601 11ALPHA-D-MANNOPYRANOSE
lig 55
NAG
A
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
NAG
A
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
GOL
A
604 6GLYCEROL
lig 58
GOL
A
605 6GLYCEROL
lig 59
GOL
A
606 6GLYCEROL
lig 60
GOL
A
607 6GLYCEROL
lig 61
GOL
A
608 6GLYCEROL
lig 62
GOL
A
609 6GLYCEROL
lig 63
GOL
A
610 6GLYCEROL
lig 64
GOL
A
611 6GLYCEROL
lig 65
GOL
A
612 6GLYCEROL
lig 66
GOL
A
613 6GLYCEROL
lig 67
GOL
B
601 6GLYCEROL
lig 68
GOL
B
602 6GLYCEROL
lig 69
MAN
B
603 11ALPHA-D-MANNOPYRANOSE
lig 70
NAG
B
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
NAG
B
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
GOL
B
606 6GLYCEROL
lig 73
GOL
B
607 6GLYCEROL
lig 74
GOL
B
608 6GLYCEROL