Analysis of Ligand-Protein Contacts in PDB entry:
9MJ1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 113 ligands in PDB entry 9MJ1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
I
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
MAN
I
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
I
7 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 11
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 14
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 15
FUC
K
5 10ALPHA-L-FUCOPYRANOSE
lig 16
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 19
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 23
NAG
N
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
GAL
N
6 11BETA-D-GALACTOPYRANOSE
lig 25
MAN
N
7 11ALPHA-D-MANNOPYRANOSE
lig 26
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 29
MAN
O
4 11ALPHA-D-MANNOPYRANOSE
lig 30
MAN
O
5 11ALPHA-D-MANNOPYRANOSE
lig 31
FUC
O
6 10ALPHA-L-FUCOPYRANOSE
lig 32
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 35
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 36
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
BMA
Q
3 11BETA-D-MANNOPYRANOSE
lig 39
MAN
Q
4 11ALPHA-D-MANNOPYRANOSE
lig 40
FUC
Q
5 10ALPHA-L-FUCOPYRANOSE
lig 41
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 44
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
BMA
S
3 11BETA-D-MANNOPYRANOSE
lig 47
MAN
S
4 11ALPHA-D-MANNOPYRANOSE
lig 48
NAG
S
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
GAL
S
6 11BETA-D-GALACTOPYRANOSE
lig 50
MAN
S
7 11ALPHA-D-MANNOPYRANOSE
lig 51
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
BMA
T
3 11BETA-D-MANNOPYRANOSE
lig 54
MAN
T
4 11ALPHA-D-MANNOPYRANOSE
lig 55
FUC
T
5 10ALPHA-L-FUCOPYRANOSE
lig 56
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
BMA
U
3 11BETA-D-MANNOPYRANOSE
lig 59
MAN
U
4 11ALPHA-D-MANNOPYRANOSE
lig 60
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 63
MAN
V
4 11ALPHA-D-MANNOPYRANOSE
lig 64
FUC
V
5 10ALPHA-L-FUCOPYRANOSE
lig 65
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 67
BMA
W
3 11BETA-D-MANNOPYRANOSE
lig 68
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
BMA
X
3 11BETA-D-MANNOPYRANOSE
lig 71
MAN
X
4 11ALPHA-D-MANNOPYRANOSE
lig 72
NAG
X
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 73
GAL
X
6 11BETA-D-GALACTOPYRANOSE
lig 74
MAN
X
7 11ALPHA-D-MANNOPYRANOSE
lig 75
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 76
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 77
BMA
Y
3 11BETA-D-MANNOPYRANOSE
lig 78
MAN
Y
4 11ALPHA-D-MANNOPYRANOSE
lig 79
FUC
Y
5 10ALPHA-L-FUCOPYRANOSE
lig 80
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 81
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 82
BMA
Z
3 11BETA-D-MANNOPYRANOSE
lig 83
MAN
Z
4 11ALPHA-D-MANNOPYRANOSE
lig 84
MAN
Z
5 11ALPHA-D-MANNOPYRANOSE
lig 85
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 86
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 87
BMA
d
3 11BETA-D-MANNOPYRANOSE
lig 88
MAN
d
4 11ALPHA-D-MANNOPYRANOSE
lig 89
NAG
d
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 90
MAN
d
6 11ALPHA-D-MANNOPYRANOSE
lig 91
XYS
e
1 10ALPHA-D-XYLOPYRANOSE
lig 92
BDP
e
2 12BETA-D-GLUCOPYRANURONIC ACID
lig 93
XYS
e
3 9ALPHA-D-XYLOPYRANOSE
lig 94
XYS
f
1 10ALPHA-D-XYLOPYRANOSE
lig 95
BDP
f
2 12BETA-D-GLUCOPYRANURONIC ACID
lig 96
XYS
f
3 9ALPHA-D-XYLOPYRANOSE
lig 97
XYS
g
1 10ALPHA-D-XYLOPYRANOSE
lig 98
BDP
g
2 12BETA-D-GLUCOPYRANURONIC ACID
lig 99
XYS
g
3 9ALPHA-D-XYLOPYRANOSE
lig 100
NAG
a
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 101
NAG
a
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 102
UNX
a
503 1UNKNOWN ATOM OR ION
lig 103
UNX
a
504 1UNKNOWN ATOM OR ION
lig 104
NAG
A
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 105
NAG
A
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 106
NAG
B
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 107
NAG
B
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 108
NAG
C
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 109
NAG
C
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 110
NAG
b
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 111
NAG
b
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 112
NAG
c
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 113
NAG
c
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE