Analysis of Ligand-Protein Contacts in PDB entry:
9MKJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 67 ligands in PDB entry 9MKJ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACE
A
1 3ACETYL GROUP
lig 2
AIB
A
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 3
AIB
A
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 4
AIB
A
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 5
NH2
A
11 1AMINO GROUP
lig 6
ACE
B
1 3ACETYL GROUP
lig 7
AIB
B
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 8
AIB
B
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 9
AIB
B
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 10
NH2
B
11 1AMINO GROUP
lig 11
ACE
C
1 3ACETYL GROUP
lig 12
AIB
C
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 13
AIB
C
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 14
AIB
C
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 15
NH2
C
11 1AMINO GROUP
lig 16
ACE
D
1 3ACETYL GROUP
lig 17
AIB
D
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 18
AIB
D
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 19
AIB
D
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 20
NH2
D
11 1AMINO GROUP
lig 21
ACE
E
1 3ACETYL GROUP
lig 22
AIB
E
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 23
AIB
E
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 24
AIB
E
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 25
NH2
E
11 1AMINO GROUP
lig 26
ACE
F
1 3ACETYL GROUP
lig 27
AIB
F
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 28
AIB
F
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 29
AIB
F
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 30
NH2
F
11 1AMINO GROUP
lig 31
ACE
G
1 3ACETYL GROUP
lig 32
AIB
G
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 33
AIB
G
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 34
AIB
G
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 35
NH2
G
11 1AMINO GROUP
lig 36
ACE
H
1 3ACETYL GROUP
lig 37
AIB
H
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 38
AIB
H
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 39
AIB
H
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 40
NH2
H
11 1AMINO GROUP
lig 41
ACE
I
1 3ACETYL GROUP
lig 42
AIB
I
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 43
AIB
I
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 44
AIB
I
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 45
NH2
I
11 1AMINO GROUP
lig 46
ACE
J
1 3ACETYL GROUP
lig 47
AIB
J
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 48
AIB
J
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 49
AIB
J
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 50
NH2
J
11 1AMINO GROUP
lig 51
ACE
K
1 3ACETYL GROUP
lig 52
AIB
K
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 53
AIB
K
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 54
AIB
K
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 55
NH2
K
11 1AMINO GROUP
lig 56
ACE
L
1 3ACETYL GROUP
lig 57
AIB
L
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 58
AIB
L
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 59
AIB
L
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 60
NH2
L
11 1AMINO GROUP
lig 61
FE2
B
101 1FE (II) ION
lig 62
FE2
C
101 1FE (II) ION
lig 63
CCN
C
102 3ACETONITRILE
lig 64
FE2
D
101 1FE (II) ION
lig 65
FE2
E
101 1FE (II) ION
lig 66
FE2
F
101 1FE (II) ION
lig 67
FE2
K
101 1FE (II) ION