Analysis of Ligand-Protein Contacts in PDB entry:
9MMP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 7 ligands in PDB entry 9MMP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
259 10PHOSPHOSERINE
lig 2
SEP
A
621 10PHOSPHOSERINE
lig 3
AGS
A
701 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 4
ZN
A
702 1ZINC ION
lig 5
ZN
A
703 1ZINC ION
lig 6
AGS
B
701 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 7
LCJ
B
702 25 IMIDAZO[1,5-A]PYRIDINE-6-CARBOXAMIDE