Analysis of Ligand-Protein Contacts in PDB entry:
9NPS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 48 ligands in PDB entry 9NPS. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 7
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
Q
3 11BETA-D-MANNOPYRANOSE
lig 10
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 13
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
S
3 11BETA-D-MANNOPYRANOSE
lig 16
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
BMA
T
3 11BETA-D-MANNOPYRANOSE
lig 19
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
U
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
U
4 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
U
5 11ALPHA-D-MANNOPYRANOSE
lig 24
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 27
MAN
V
4 11ALPHA-D-MANNOPYRANOSE
lig 28
MAN
V
5 11ALPHA-D-MANNOPYRANOSE
lig 29
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
BMA
W
3 11BETA-D-MANNOPYRANOSE
lig 32
MAN
W
4 11ALPHA-D-MANNOPYRANOSE
lig 33
MAN
W
5 11ALPHA-D-MANNOPYRANOSE
lig 34
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
BMA
X
3 11BETA-D-MANNOPYRANOSE
lig 37
MAN
X
4 11ALPHA-D-MANNOPYRANOSE
lig 38
MAN
X
5 11ALPHA-D-MANNOPYRANOSE
lig 39
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
BMA
Y
3 11BETA-D-MANNOPYRANOSE
lig 42
MAN
Y
4 11ALPHA-D-MANNOPYRANOSE
lig 43
MAN
Y
5 11ALPHA-D-MANNOPYRANOSE
lig 44
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
BMA
Z
3 11BETA-D-MANNOPYRANOSE
lig 47
MAN
Z
4 11ALPHA-D-MANNOPYRANOSE
lig 48
MAN
Z
5 11ALPHA-D-MANNOPYRANOSE