Analysis of Ligand-Protein Contacts in PDB entry:
9NPX


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 136 ligands in PDB entry 9NPX. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
IAS
N
138 8BETA-L-ASPARTIC ACID
lig 2
ACE
V
0 3ACETYL GROUP
lig 3
ACE
h
1 3ACETYL GROUP
lig 4
A2M
i
27 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 5
PSU
i
34 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 6
PSU
i
36 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 7
PSU
i
93 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 8
A2M
i
99 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 9
PSU
i
105 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 10
PSU
i
109 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 11
OMU
i
116 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 12
PSU
i
119 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 13
OMU
i
121 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 14
A2M
i
159 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 15
A2M
i
166 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 16
OMU
i
172 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 17
OMC
i
174 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 18
PSU
i
218 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 19
OMU
i
354 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 20
PSU
i
406 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 21
OMU
i
428 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 22
OMG
i
436 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 23
OMC
i
462 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 24
A2M
i
468 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 25
A2M
i
484 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 26
OMG
i
509 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 27
A2M
i
512 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 28
OMC
i
517 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 29
PSU
i
572 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 30
A2M
i
576 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 31
A2M
i
590 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 32
OMG
i
601 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 33
PSU
i
609 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 34
OMU
i
627 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 35
OMG
i
644 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 36
PSU
i
649 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 37
PSU
i
651 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 38
A2M
i
668 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 39
PSU
i
681 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 40
OMG
i
683 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 41
PSU
i
686 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 42
OMC
i
797 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 43
OMU
i
799 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 44
PSU
i
814 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 45
PSU
i
815 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 46
PSU
i
822 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 47
PSU
i
863 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 48
PSU
i
866 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 49
PSU
i
966 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 50
PSU
i
1004 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 51
A2M
i
1031 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 52
PSU
i
1045 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 53
PSU
i
1046 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 54
PSU
i
1056 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 55
PSU
i
1081 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 56
PSU
i
1136 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 57
PSU
i
1174 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 58
PSU
i
1177 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 59
PSU
i
1692 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 60
OMC
i
1703 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 61
OMU
i
1804 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 62
6MZ
i
1832 23N6-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 63
4AC
i
1842 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 64
MA6
i
1850 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 65
MA6
i
1851 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 66
MG
F
301 1MAGNESIUM ION
lig 67
K
N
201 1POTASSIUM ION
lig 68
K
Z
201 1POTASSIUM ION
lig 69
ZN
Z
202 1ZINC ION
lig 70
MG
i
1901 1MAGNESIUM ION
lig 71
MG
i
1902 1MAGNESIUM ION
lig 72
MG
i
1903 1MAGNESIUM ION
lig 73
MG
i
1904 1MAGNESIUM ION
lig 74
MG
i
1905 1MAGNESIUM ION
lig 75
MG
i
1906 1MAGNESIUM ION
lig 76
MG
i
1907 1MAGNESIUM ION
lig 77
MG
i
1908 1MAGNESIUM ION
lig 78
MG
i
1909 1MAGNESIUM ION
lig 79
MG
i
1910 1MAGNESIUM ION
lig 80
MG
i
1911 1MAGNESIUM ION
lig 81
MG
i
1912 1MAGNESIUM ION
lig 82
MG
i
1913 1MAGNESIUM ION
lig 83
MG
i
1914 1MAGNESIUM ION
lig 84
MG
i
1915 1MAGNESIUM ION
lig 85
MG
i
1916 1MAGNESIUM ION
lig 86
MG
i
1917 1MAGNESIUM ION
lig 87
MG
i
1918 1MAGNESIUM ION
lig 88
MG
i
1919 1MAGNESIUM ION
lig 89
MG
i
1920 1MAGNESIUM ION
lig 90
MG
i
1921 1MAGNESIUM ION
lig 91
MG
i
1922 1MAGNESIUM ION
lig 92
MG
i
1923 1MAGNESIUM ION
lig 93
MG
i
1924 1MAGNESIUM ION
lig 94
MG
i
1925 1MAGNESIUM ION
lig 95
MG
i
1926 1MAGNESIUM ION
lig 96
MG
i
1927 1MAGNESIUM ION
lig 97
MG
i
1928 1MAGNESIUM ION
lig 98
MG
i
1929 1MAGNESIUM ION
lig 99
MG
i
1930 1MAGNESIUM ION
lig 100
MG
i
1931 1MAGNESIUM ION
lig 101
MG
i
1932 1MAGNESIUM ION
lig 102
MG
i
1933 1MAGNESIUM ION
lig 103
MG
i
1934 1MAGNESIUM ION
lig 104
MG
i
1935 1MAGNESIUM ION
lig 105
MG
i
1936 1MAGNESIUM ION
lig 106
MG
i
1937 1MAGNESIUM ION
lig 107
MG
i
1938 1MAGNESIUM ION
lig 108
MG
i
1939 1MAGNESIUM ION
lig 109
MG
i
1940 1MAGNESIUM ION
lig 110
MG
i
1941 1MAGNESIUM ION
lig 111
MG
i
1942 1MAGNESIUM ION
lig 112
MG
i
1943 1MAGNESIUM ION
lig 113
MG
i
1944 1MAGNESIUM ION
lig 114
MG
i
1945 1MAGNESIUM ION
lig 115
MG
i
1946 1MAGNESIUM ION
lig 116
MG
i
1947 1MAGNESIUM ION
lig 117
MG
i
1948 1MAGNESIUM ION
lig 118
MG
i
1949 1MAGNESIUM ION
lig 119
MG
i
1950 1MAGNESIUM ION
lig 120
MG
i
1951 1MAGNESIUM ION
lig 121
MG
i
1952 1MAGNESIUM ION
lig 122
MG
i
1953 1MAGNESIUM ION
lig 123
MG
i
1954 1MAGNESIUM ION
lig 124
MG
i
1955 1MAGNESIUM ION
lig 125
MG
i
1956 1MAGNESIUM ION
lig 126
K
i
1957 1POTASSIUM ION
lig 127
K
i
1958 1POTASSIUM ION
lig 128
K
i
1959 1POTASSIUM ION
lig 129
K
i
1960 1POTASSIUM ION
lig 130
K
i
1961 1POTASSIUM ION
lig 131
K
i
1962 1POTASSIUM ION
lig 132
K
i
1963 1POTASSIUM ION
lig 133
K
i
1964 1POTASSIUM ION
lig 134
K
i
1965 1POTASSIUM ION
lig 135
K
i
1966 1POTASSIUM ION
lig 136
K
i
1967 1POTASSIUM ION