Analysis of Ligand-Protein Contacts in PDB entry:
9NPY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 52 ligands in PDB entry 9NPY. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NMM
T
67 12 ACID
lig 2
PSU
i
1232 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 3
PSU
i
1238 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 4
PSU
i
1244 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 5
B8N
i
1248 28 ACID
lig 6
OMC
i
1272 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 7
OMU
i
1288 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 8
OMU
i
1326 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 9
OMG
i
1328 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 10
4AC
i
1337 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 11
PSU
i
1347 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 12
PSU
i
1367 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 13
A2M
i
1383 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 14
OMC
i
1391 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 15
OMU
i
1442 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 16
PSU
i
1445 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 17
OMG
i
1447 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 18
OMG
i
1490 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 19
G7M
i
1639 24N7-METHYL-GUANOSINE-5'-MONOPHOSPHATE
lig 20
A2M
i
1678 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 21
MG
S
201 1MAGNESIUM ION
lig 22
MG
T
201 1MAGNESIUM ION
lig 23
ZN
b
201 1ZINC ION
lig 24
ZN
d
101 1ZINC ION
lig 25
K
d
102 1POTASSIUM ION
lig 26
MG
i
1901 1MAGNESIUM ION
lig 27
MG
i
1902 1MAGNESIUM ION
lig 28
MG
i
1903 1MAGNESIUM ION
lig 29
MG
i
1904 1MAGNESIUM ION
lig 30
MG
i
1905 1MAGNESIUM ION
lig 31
MG
i
1906 1MAGNESIUM ION
lig 32
MG
i
1907 1MAGNESIUM ION
lig 33
MG
i
1908 1MAGNESIUM ION
lig 34
MG
i
1909 1MAGNESIUM ION
lig 35
MG
i
1910 1MAGNESIUM ION
lig 36
MG
i
1911 1MAGNESIUM ION
lig 37
MG
i
1912 1MAGNESIUM ION
lig 38
MG
i
1913 1MAGNESIUM ION
lig 39
MG
i
1914 1MAGNESIUM ION
lig 40
MG
i
1915 1MAGNESIUM ION
lig 41
MG
i
1916 1MAGNESIUM ION
lig 42
MG
i
1917 1MAGNESIUM ION
lig 43
MG
i
1918 1MAGNESIUM ION
lig 44
MG
i
1919 1MAGNESIUM ION
lig 45
K
i
1920 1POTASSIUM ION
lig 46
K
i
1921 1POTASSIUM ION
lig 47
K
i
1922 1POTASSIUM ION
lig 48
K
i
1923 1POTASSIUM ION
lig 49
K
i
1924 1POTASSIUM ION
lig 50
K
i
1925 1POTASSIUM ION
lig 51
K
i
1926 1POTASSIUM ION
lig 52
K
E
301 1POTASSIUM ION