Analysis of Ligand-Protein Contacts in PDB entry:
9PQQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 9PQQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
401 1MAGNESIUM ION
lig 2
MG
A
402 1MAGNESIUM ION
lig 3
AGS
A
403 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 4
AGS
B
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 5
AGS
B
402 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 6
MG
B
403 1MAGNESIUM ION
lig 7
MG
B
404 1MAGNESIUM ION
lig 8
MG
C
401 1MAGNESIUM ION
lig 9
MG
C
402 1MAGNESIUM ION
lig 10
AGS
D
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 11
AGS
D
402 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 12
MG
D
403 1MAGNESIUM ION
lig 13
MG
D
404 1MAGNESIUM ION
lig 14
AGS
E
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 15
MG
E
402 1MAGNESIUM ION
lig 16
MG
E
403 1MAGNESIUM ION
lig 17
MG
F
401 1MAGNESIUM ION
lig 18
MG
F
402 1MAGNESIUM ION
lig 19
MG
G
401 1MAGNESIUM ION
lig 20
AGS
H
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 21
AGS
H
402 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 22
MG
H
403 1MAGNESIUM ION
lig 23
AGS
I
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 24
MG
I
402 1MAGNESIUM ION
lig 25
AGS
J
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 26
MG
J
402 1MAGNESIUM ION
lig 27
AGS
K
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 28
MG
K
402 1MAGNESIUM ION
lig 29
AGS
L
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 30
MG
L
402 1MAGNESIUM ION