Analysis of Ligand-Protein Contacts in PDB entry:
9PVC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 9PVC. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
KCX
A
201 12LYSINE NZ-CARBOXYLIC ACID
lig 2
KCX
B
201 12LYSINE NZ-CARBOXYLIC ACID
lig 3
KCX
C
201 12LYSINE NZ-CARBOXYLIC ACID
lig 4
KCX
D
201 12LYSINE NZ-CARBOXYLIC ACID
lig 5
KCX
E
201 12LYSINE NZ-CARBOXYLIC ACID
lig 6
KCX
F
201 12LYSINE NZ-CARBOXYLIC ACID
lig 7
KCX
G
201 12LYSINE NZ-CARBOXYLIC ACID
lig 8
KCX
H
201 12LYSINE NZ-CARBOXYLIC ACID
lig 9
CAP
A
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 10
MG
A
502 1MAGNESIUM ION
lig 11
CAP
B
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 12
MG
B
502 1MAGNESIUM ION
lig 13
CAP
C
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 14
MG
C
502 1MAGNESIUM ION
lig 15
CAP
D
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 16
MG
D
502 1MAGNESIUM ION
lig 17
CAP
E
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 18
MG
E
502 1MAGNESIUM ION
lig 19
CAP
F
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 20
MG
F
502 1MAGNESIUM ION
lig 21
CAP
G
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 22
MG
G
502 1MAGNESIUM ION
lig 23
CAP
H
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 24
MG
H
502 1MAGNESIUM ION