Analysis of Ligand-Protein Contacts in PDB entry:
9RFY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 48 ligands in PDB entry 9RFY. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
C
7 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BMA
F
2 11BETA-D-MANNOPYRANOSE
lig 14
MAN
F
3 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 16
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
HEM
A
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 19
GOL
A
402 6GLYCEROL
lig 20
MES
A
403 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 21
NAG
A
404 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
MES
A
405 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 23
NAG
A
406 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
GOL
A
407 6GLYCEROL
lig 25
MG
A
408 1MAGNESIUM ION
lig 26
ZN
A
409 1ZINC ION
lig 27
ZN
A
410 1ZINC ION
lig 28
ZN
A
411 1ZINC ION
lig 29
ZN
A
412 1ZINC ION
lig 30
ZN
A
413 1ZINC ION
lig 31
ZN
A
414 1ZINC ION
lig 32
ZN
A
415 1ZINC ION
lig 33
ZN
A
416 1ZINC ION
lig 34
NAG
B
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
HEM
B
402 43PROTOPORPHYRIN IX CONTAINING FE
lig 36
NAG
B
403 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
MES
B
404 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 38
MES
B
405 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 39
MES
B
406 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 40
GOL
B
407 6GLYCEROL
lig 41
PO4
B
408 5PHOSPHATE ION
lig 42
MG
B
409 1MAGNESIUM ION
lig 43
ZN
B
410 1ZINC ION
lig 44
ZN
B
411 1ZINC ION
lig 45
ZN
B
412 1ZINC ION
lig 46
ZN
B
413 1ZINC ION
lig 47
ZN
B
414 1ZINC ION
lig 48
ZN
B
415 1ZINC ION