Analysis of Ligand-Protein Contacts in PDB entry:
9RN8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 31 ligands in PDB entry 9RN8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MLZ
A
154 10N-METHYL-LYSINE
lig 2
MLZ
A
174 10N-METHYL-LYSINE
lig 3
MLZ
A
180 10N-METHYL-LYSINE
lig 4
9IJ
A
205 132-CYANO-L-PHENYLALANINE
lig 5
MLZ
A
308 10N-METHYL-LYSINE
lig 6
MLZ
A
310 10N-METHYL-LYSINE
lig 7
MLZ
A
432 10N-METHYL-LYSINE
lig 8
MLZ
A
446 10N-METHYL-LYSINE
lig 9
MLZ
A
467 10N-METHYL-LYSINE
lig 10
MLZ
B
68 10N-METHYL-LYSINE
lig 11
MLZ
B
154 10N-METHYL-LYSINE
lig 12
MLZ
B
174 10N-METHYL-LYSINE
lig 13
MLZ
B
180 10N-METHYL-LYSINE
lig 14
9IJ
B
205 132-CYANO-L-PHENYLALANINE
lig 15
MLZ
B
207 10N-METHYL-LYSINE
lig 16
MLZ
B
308 10N-METHYL-LYSINE
lig 17
MLZ
B
310 10N-METHYL-LYSINE
lig 18
MLZ
B
432 10N-METHYL-LYSINE
lig 19
MLZ
B
446 10N-METHYL-LYSINE
lig 20
MLZ
B
467 10N-METHYL-LYSINE
lig 21
EL5
A
601 43 YLIDENE]METHYL}-4-METHYL-2H-PYRROL-3-YL]P
lig 22
MPD
A
602 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 23
MPD
A
603 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 24
PEG
A
604 7DI(HYDROXYETHYL)ETHER
lig 25
MES
A
605 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 26
CL
A
606 1CHLORIDE ION
lig 27
CL
A
607 1CHLORIDE ION
lig 28
EL5
B
601 43 YLIDENE]METHYL}-4-METHYL-2H-PYRROL-3-YL]P
lig 29
MPD
B
602 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 30
MPD
B
603 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 31
PEG
B
604 7DI(HYDROXYETHYL)ETHER