Analysis of Ligand-Protein Contacts in PDB entry:
9S1M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 319 ligands in PDB entry 9S1M. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
Y
39 11PHOSPHOTHREONINE
lig 2
CHL
1
601 55CHLOROPHYLL B
lig 3
CLA
1
602 61CHLOROPHYLL A
lig 4
CLA
1
603 55CHLOROPHYLL A
lig 5
CLA
1
604 49CHLOROPHYLL A
lig 6
CLA
1
605 40CHLOROPHYLL A
lig 7
CHL
1
606 41CHLOROPHYLL B
lig 8
CLA
1
607 44CHLOROPHYLL A
lig 9
CLA
1
608 65CHLOROPHYLL A
lig 10
CLA
1
609 59CHLOROPHYLL A
lig 11
CLA
1
610 55CHLOROPHYLL A
lig 12
CLA
1
611 45CHLOROPHYLL A
lig 13
CLA
1
612 65CHLOROPHYLL A
lig 14
CLA
1
613 45CHLOROPHYLL A
lig 15
CLA
1
614 45CHLOROPHYLL A
lig 16
LUT
1
615 42 CAROTENE-3,3'-DIOL
lig 17
XAT
1
616 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 18
BCR
1
617 40BETA-CAROTENE
lig 19
LHG
1
618 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 20
LMG
1
619 531,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 21
LHG
1
620 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 22
LMG
1
621 491,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 23
LHG
1
622 381,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 24
CHL
2
601 47CHLOROPHYLL B
lig 25
CLA
2
602 65CHLOROPHYLL A
lig 26
CLA
2
603 44CHLOROPHYLL A
lig 27
CLA
2
604 65CHLOROPHYLL A
lig 28
CHL
2
605 42CHLOROPHYLL B
lig 29
CHL
2
606 43CHLOROPHYLL B
lig 30
CHL
2
607 51CHLOROPHYLL B
lig 31
CLA
2
608 45CHLOROPHYLL A
lig 32
CLA
2
609 55CHLOROPHYLL A
lig 33
CLA
2
610 41CHLOROPHYLL A
lig 34
CLA
2
611 45CHLOROPHYLL A
lig 35
CLA
2
612 55CHLOROPHYLL A
lig 36
CLA
2
613 43CHLOROPHYLL A
lig 37
CHL
2
614 43CHLOROPHYLL B
lig 38
LUT
2
615 42 CAROTENE-3,3'-DIOL
lig 39
XAT
2
616 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 40
LHG
2
617 371,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 41
CLA
2
618 46CHLOROPHYLL A
lig 42
BCR
2
619 40BETA-CAROTENE
lig 43
BCR
3
601 40BETA-CAROTENE
lig 44
CLA
3
602 60CHLOROPHYLL A
lig 45
CLA
3
603 55CHLOROPHYLL A
lig 46
CLA
3
604 45CHLOROPHYLL A
lig 47
CLA
3
605 47CHLOROPHYLL A
lig 48
CLA
3
606 41CHLOROPHYLL A
lig 49
CLA
3
607 45CHLOROPHYLL A
lig 50
CHL
3
608 47CHLOROPHYLL B
lig 51
CLA
3
609 45CHLOROPHYLL A
lig 52
CLA
3
610 41CHLOROPHYLL A
lig 53
CLA
3
611 43CHLOROPHYLL A
lig 54
CLA
3
612 44CHLOROPHYLL A
lig 55
CLA
3
613 40CHLOROPHYLL A
lig 56
CLA
3
614 40CHLOROPHYLL A
lig 57
LUT
3
615 42 CAROTENE-3,3'-DIOL
lig 58
XAT
3
616 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 59
CLA
3
617 55CHLOROPHYLL A
lig 60
CLA
4
301 60CHLOROPHYLL A
lig 61
CLA
4
302 45CHLOROPHYLL A
lig 62
CLA
4
303 45CHLOROPHYLL A
lig 63
CHL
4
304 56CHLOROPHYLL B
lig 64
CHL
4
305 46CHLOROPHYLL B
lig 65
CHL
4
306 51CHLOROPHYLL B
lig 66
CLA
4
307 45CHLOROPHYLL A
lig 67
CLA
4
308 54CHLOROPHYLL A
lig 68
CLA
4
309 60CHLOROPHYLL A
lig 69
CLA
4
310 41CHLOROPHYLL A
lig 70
CLA
4
311 57CHLOROPHYLL A
lig 71
CLA
4
312 45CHLOROPHYLL A
lig 72
CLA
4
313 50CHLOROPHYLL A
lig 73
CHL
4
314 41CHLOROPHYLL B
lig 74
LUT
4
315 42 CAROTENE-3,3'-DIOL
lig 75
XAT
4
316 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 76
BCR
4
317 40BETA-CAROTENE
lig 77
LMG
4
318 361,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 78
LMT
4
319 35DODECYL-BETA-D-MALTOSIDE
lig 79
CHL
5
601 55CHLOROPHYLL B
lig 80
CLA
5
602 61CHLOROPHYLL A
lig 81
CLA
5
603 45CHLOROPHYLL A
lig 82
CLA
5
604 49CHLOROPHYLL A
lig 83
CLA
5
605 40CHLOROPHYLL A
lig 84
CHL
5
606 41CHLOROPHYLL B
lig 85
CLA
5
607 44CHLOROPHYLL A
lig 86
CLA
5
608 45CHLOROPHYLL A
lig 87
CLA
5
609 45CHLOROPHYLL A
lig 88
CLA
5
610 45CHLOROPHYLL A
lig 89
CLA
5
611 45CHLOROPHYLL A
lig 90
CLA
5
612 65CHLOROPHYLL A
lig 91
CLA
5
613 45CHLOROPHYLL A
lig 92
CLA
5
614 45CHLOROPHYLL A
lig 93
LUT
5
615 42 CAROTENE-3,3'-DIOL
lig 94
XAT
5
616 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 95
BCR
5
617 40BETA-CAROTENE
lig 96
LHG
5
618 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 97
LUT
5
619 42 CAROTENE-3,3'-DIOL
lig 98
LMG
5
620 531,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 99
LMG
5
621 491,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 100
CLA
6
601 46CHLOROPHYLL A
lig 101
CLA
6
602 60CHLOROPHYLL A
lig 102
CLA
6
603 45CHLOROPHYLL A
lig 103
CLA
6
604 45CHLOROPHYLL A
lig 104
CHL
6
605 56CHLOROPHYLL B
lig 105
CHL
6
606 46CHLOROPHYLL B
lig 106
CHL
6
607 51CHLOROPHYLL B
lig 107
CLA
6
608 45CHLOROPHYLL A
lig 108
CLA
6
609 54CHLOROPHYLL A
lig 109
CLA
6
610 45CHLOROPHYLL A
lig 110
CLA
6
611 41CHLOROPHYLL A
lig 111
CLA
6
612 57CHLOROPHYLL A
lig 112
CLA
6
613 45CHLOROPHYLL A
lig 113
CLA
6
614 50CHLOROPHYLL A
lig 114
CHL
6
615 41CHLOROPHYLL B
lig 115
LUT
6
616 42 CAROTENE-3,3'-DIOL
lig 116
XAT
6
617 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 117
BCR
6
618 40BETA-CAROTENE
lig 118
LMG
6
619 361,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 119
BCR
6
620 40BETA-CAROTENE
lig 120
LMT
6
621 35DODECYL-BETA-D-MALTOSIDE
lig 121
CLA
A
801 65CHLOROPHYLL A
lig 122
CLA
A
802 65CHLOROPHYLL A
lig 123
CLA
A
803 65CHLOROPHYLL A
lig 124
CLA
A
804 55CHLOROPHYLL A
lig 125
CLA
A
805 45CHLOROPHYLL A
lig 126
CLA
A
806 65CHLOROPHYLL A
lig 127
CLA
A
807 65CHLOROPHYLL A
lig 128
CLA
A
808 50CHLOROPHYLL A
lig 129
CLA
A
809 55CHLOROPHYLL A
lig 130
CLA
A
810 50CHLOROPHYLL A
lig 131
CLA
A
811 65CHLOROPHYLL A
lig 132
CLA
A
812 54CHLOROPHYLL A
lig 133
CLA
A
813 65CHLOROPHYLL A
lig 134
CLA
A
814 45CHLOROPHYLL A
lig 135
CLA
A
815 42CHLOROPHYLL A
lig 136
CLA
A
816 45CHLOROPHYLL A
lig 137
CLA
A
817 60CHLOROPHYLL A
lig 138
CLA
A
818 59CHLOROPHYLL A
lig 139
CLA
A
819 65CHLOROPHYLL A
lig 140
CLA
A
820 45CHLOROPHYLL A
lig 141
CLA
A
821 65CHLOROPHYLL A
lig 142
CLA
A
822 42CHLOROPHYLL A
lig 143
CLA
A
823 41CHLOROPHYLL A
lig 144
CLA
A
824 55CHLOROPHYLL A
lig 145
CLA
A
825 65CHLOROPHYLL A
lig 146
CLA
A
826 65CHLOROPHYLL A
lig 147
CLA
A
827 65CHLOROPHYLL A
lig 148
CLA
A
828 65CHLOROPHYLL A
lig 149
CLA
A
829 65CHLOROPHYLL A
lig 150
CLA
A
830 65CHLOROPHYLL A
lig 151
CLA
A
831 50CHLOROPHYLL A
lig 152
CLA
A
832 56CHLOROPHYLL A
lig 153
CLA
A
833 65CHLOROPHYLL A
lig 154
CLA
A
834 65CHLOROPHYLL A
lig 155
CLA
A
835 45CHLOROPHYLL A
lig 156
CLA
A
836 45CHLOROPHYLL A
lig 157
CLA
A
837 51CHLOROPHYLL A
lig 158
CLA
A
838 55CHLOROPHYLL A
lig 159
CLA
A
839 50CHLOROPHYLL A
lig 160
CLA
A
840 65CHLOROPHYLL A
lig 161
CLA
A
841 65CHLOROPHYLL A
lig 162
CLA
A
842 65CHLOROPHYLL A
lig 163
CLA
A
843 57CHLOROPHYLL A
lig 164
PQN
A
844 33PHYLLOQUINONE
lig 165
BCR
A
845 40BETA-CAROTENE
lig 166
BCR
A
846 40BETA-CAROTENE
lig 167
BCR
A
847 40BETA-CAROTENE
lig 168
BCR
A
848 40BETA-CAROTENE
lig 169
BCR
A
849 40BETA-CAROTENE
lig 170
SF4
A
850 8IRON/SULFUR CLUSTER
lig 171
LHG
A
851 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 172
LMT
A
852 35DODECYL-BETA-D-MALTOSIDE
lig 173
LHG
A
853 301,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 174
BCR
A
854 40BETA-CAROTENE
lig 175
CLA
B
801 65CHLOROPHYLL A
lig 176
CLA
B
802 65CHLOROPHYLL A
lig 177
CLA
B
803 41CHLOROPHYLL A
lig 178
CLA
B
804 65CHLOROPHYLL A
lig 179
CLA
B
805 65CHLOROPHYLL A
lig 180
CLA
B
806 52CHLOROPHYLL A
lig 181
CLA
B
807 65CHLOROPHYLL A
lig 182
CLA
B
808 55CHLOROPHYLL A
lig 183
CLA
B
809 65CHLOROPHYLL A
lig 184
CLA
B
810 54CHLOROPHYLL A
lig 185
CLA
B
811 43CHLOROPHYLL A
lig 186
CLA
B
812 65CHLOROPHYLL A
lig 187
CLA
B
813 65CHLOROPHYLL A
lig 188
CLA
B
814 55CHLOROPHYLL A
lig 189
CLA
B
815 55CHLOROPHYLL A
lig 190
CLA
B
816 59CHLOROPHYLL A
lig 191
CLA
B
817 60CHLOROPHYLL A
lig 192
CLA
B
818 55CHLOROPHYLL A
lig 193
CLA
B
819 50CHLOROPHYLL A
lig 194
CLA
B
820 55CHLOROPHYLL A
lig 195
CLA
B
821 55CHLOROPHYLL A
lig 196
CLA
B
822 60CHLOROPHYLL A
lig 197
CLA
B
823 65CHLOROPHYLL A
lig 198
CLA
B
824 50CHLOROPHYLL A
lig 199
CLA
B
825 62CHLOROPHYLL A
lig 200
CLA
B
826 60CHLOROPHYLL A
lig 201
CLA
B
827 65CHLOROPHYLL A
lig 202
CLA
B
828 56CHLOROPHYLL A
lig 203
CLA
B
829 43CHLOROPHYLL A
lig 204
CLA
B
830 43CHLOROPHYLL A
lig 205
CLA
B
831 65CHLOROPHYLL A
lig 206
CLA
B
832 45CHLOROPHYLL A
lig 207
CLA
B
833 60CHLOROPHYLL A
lig 208
CLA
B
834 42CHLOROPHYLL A
lig 209
CLA
B
835 50CHLOROPHYLL A
lig 210
CLA
B
836 65CHLOROPHYLL A
lig 211
CLA
B
837 47CHLOROPHYLL A
lig 212
CLA
B
838 65CHLOROPHYLL A
lig 213
CLA
B
839 65CHLOROPHYLL A
lig 214
CLA
B
840 65CHLOROPHYLL A
lig 215
PQN
B
841 33PHYLLOQUINONE
lig 216
BCR
B
842 40BETA-CAROTENE
lig 217
BCR
B
843 40BETA-CAROTENE
lig 218
BCR
B
844 40BETA-CAROTENE
lig 219
BCR
B
845 40BETA-CAROTENE
lig 220
BCR
B
846 40BETA-CAROTENE
lig 221
BCR
B
847 40BETA-CAROTENE
lig 222
BCR
B
848 40BETA-CAROTENE
lig 223
DGD
B
849 61DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 224
LMG
B
850 521,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 225
SF4
C
101 8IRON/SULFUR CLUSTER
lig 226
SF4
C
102 8IRON/SULFUR CLUSTER
lig 227
LUT
F
301 42 CAROTENE-3,3'-DIOL
lig 228
BCR
F
302 40BETA-CAROTENE
lig 229
LMT
F
303 35DODECYL-BETA-D-MALTOSIDE
lig 230
CLA
F
304 41CHLOROPHYLL A
lig 231
BCR
F
305 40BETA-CAROTENE
lig 232
LMG
F
306 471,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 233
LMG
F
307 301,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 234
LMT
G
201 35DODECYL-BETA-D-MALTOSIDE
lig 235
CLA
G
202 45CHLOROPHYLL A
lig 236
CLA
G
203 42CHLOROPHYLL A
lig 237
CLA
G
204 45CHLOROPHYLL A
lig 238
BCR
G
205 40BETA-CAROTENE
lig 239
LMG
G
206 501,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 240
CLA
H
201 60CHLOROPHYLL A
lig 241
BCR
I
101 40BETA-CAROTENE
lig 242
CLA
J
101 42CHLOROPHYLL A
lig 243
CLA
J
102 42CHLOROPHYLL A
lig 244
BCR
J
103 40BETA-CAROTENE
lig 245
CLA
K
201 37CHLOROPHYLL A
lig 246
CLA
K
202 45CHLOROPHYLL A
lig 247
CLA
K
203 46CHLOROPHYLL A
lig 248
CLA
K
204 39CHLOROPHYLL A
lig 249
BCR
K
205 40BETA-CAROTENE
lig 250
CLA
L
301 65CHLOROPHYLL A
lig 251
BCR
L
302 40BETA-CAROTENE
lig 252
CLA
L
303 45CHLOROPHYLL A
lig 253
CLA
L
304 60CHLOROPHYLL A
lig 254
CLA
L
305 45CHLOROPHYLL A
lig 255
BCR
L
306 40BETA-CAROTENE
lig 256
BCR
L
307 40BETA-CAROTENE
lig 257
BCR
L
308 40BETA-CAROTENE
lig 258
BCR
O
201 40BETA-CAROTENE
lig 259
CLA
O
202 50CHLOROPHYLL A
lig 260
CLA
O
203 62CHLOROPHYLL A
lig 261
BCR
O
204 40BETA-CAROTENE
lig 262
BCR
O
205 40BETA-CAROTENE
lig 263
CLA
O
206 49CHLOROPHYLL A
lig 264
CLA
O
207 38CHLOROPHYLL A
lig 265
XAT
O
208 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 266
CHL
X
601 46CHLOROPHYLL B
lig 267
CLA
X
602 45CHLOROPHYLL A
lig 268
CLA
X
603 53CHLOROPHYLL A
lig 269
CLA
X
604 45CHLOROPHYLL A
lig 270
CHL
X
605 42CHLOROPHYLL B
lig 271
CHL
X
606 46CHLOROPHYLL B
lig 272
CHL
X
607 46CHLOROPHYLL B
lig 273
CHL
X
608 46CHLOROPHYLL B
lig 274
CLA
X
609 45CHLOROPHYLL A
lig 275
CLA
X
610 45CHLOROPHYLL A
lig 276
CLA
X
611 45CHLOROPHYLL A
lig 277
CLA
X
612 45CHLOROPHYLL A
lig 278
CLA
X
613 45CHLOROPHYLL A
lig 279
LUT
X
614 42 CAROTENE-3,3'-DIOL
lig 280
LUT
X
615 42 CAROTENE-3,3'-DIOL
lig 281
NEX
X
616 44 DIOL
lig 282
LHG
X
617 371,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 283
CLA
X
618 45CHLOROPHYLL A
lig 284
CHL
Y
601 46CHLOROPHYLL B
lig 285
CLA
Y
602 65CHLOROPHYLL A
lig 286
CLA
Y
603 45CHLOROPHYLL A
lig 287
CLA
Y
604 45CHLOROPHYLL A
lig 288
CHL
Y
605 42CHLOROPHYLL B
lig 289
CHL
Y
606 46CHLOROPHYLL B
lig 290
CHL
Y
607 46CHLOROPHYLL B
lig 291
CHL
Y
608 46CHLOROPHYLL B
lig 292
CHL
Y
609 46CHLOROPHYLL B
lig 293
CLA
Y
610 45CHLOROPHYLL A
lig 294
CLA
Y
611 45CHLOROPHYLL A
lig 295
CLA
Y
612 45CHLOROPHYLL A
lig 296
CLA
Y
613 55CHLOROPHYLL A
lig 297
CLA
Y
614 45CHLOROPHYLL A
lig 298
LUT
Y
615 42 CAROTENE-3,3'-DIOL
lig 299
LUT
Y
616 42 CAROTENE-3,3'-DIOL
lig 300
NEX
Y
617 44 DIOL
lig 301
LHG
Y
618 351,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 302
CHL
Y
619 47CHLOROPHYLL B
lig 303
CHL
Z
301 46CHLOROPHYLL B
lig 304
CHL
Z
302 46CHLOROPHYLL B
lig 305
CLA
Z
303 60CHLOROPHYLL A
lig 306
CLA
Z
304 45CHLOROPHYLL A
lig 307
CLA
Z
305 50CHLOROPHYLL A
lig 308
CHL
Z
306 46CHLOROPHYLL B
lig 309
CHL
Z
307 46CHLOROPHYLL B
lig 310
CHL
Z
308 42CHLOROPHYLL B
lig 311
CHL
Z
309 46CHLOROPHYLL B
lig 312
CLA
Z
310 45CHLOROPHYLL A
lig 313
CLA
Z
311 45CHLOROPHYLL A
lig 314
CLA
Z
312 45CHLOROPHYLL A
lig 315
CLA
Z
313 46CHLOROPHYLL A
lig 316
LUT
Z
314 42 CAROTENE-3,3'-DIOL
lig 317
LUT
Z
315 42 CAROTENE-3,3'-DIOL
lig 318
NEX
Z
316 44 DIOL
lig 319
LHG
Z
317 321,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE