Analysis of Ligand-Protein Contacts in PDB entry:
9S3E


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 70 ligands in PDB entry 9S3E. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OEX
A
401 10CA-MN4-O5 CLUSTER
lig 2
FE2
A
402 1FE (II) ION
lig 3
CL
A
403 1CHLORIDE ION
lig 4
CL
A
404 1CHLORIDE ION
lig 5
CLA
A
405 65CHLOROPHYLL A
lig 6
CLA
A
406 50CHLOROPHYLL A
lig 7
PHO
A
407 64PHEOPHYTIN A
lig 8
CLA
A
408 60CHLOROPHYLL A
lig 9
BCR
A
409 40BETA-CAROTENE
lig 10
SQD
A
410 50 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 11
PL9
A
411 13 BENZOQUINONE
lig 12
BCT
A
412 4BICARBONATE ION
lig 13
CLA
B
501 65CHLOROPHYLL A
lig 14
CLA
B
502 65CHLOROPHYLL A
lig 15
CLA
B
503 65CHLOROPHYLL A
lig 16
CLA
B
504 65CHLOROPHYLL A
lig 17
CLA
B
505 65CHLOROPHYLL A
lig 18
CLA
B
506 65CHLOROPHYLL A
lig 19
CLA
B
507 65CHLOROPHYLL A
lig 20
CLA
B
508 65CHLOROPHYLL A
lig 21
CLA
B
509 65CHLOROPHYLL A
lig 22
CLA
B
510 65CHLOROPHYLL A
lig 23
CLA
B
511 65CHLOROPHYLL A
lig 24
CLA
B
512 65CHLOROPHYLL A
lig 25
CLA
B
513 65CHLOROPHYLL A
lig 26
CLA
B
514 53CHLOROPHYLL A
lig 27
CLA
B
515 65CHLOROPHYLL A
lig 28
CLA
B
516 65CHLOROPHYLL A
lig 29
BCR
B
517 40BETA-CAROTENE
lig 30
BCR
B
518 40BETA-CAROTENE
lig 31
BCR
B
519 40BETA-CAROTENE
lig 32
LMG
B
520 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 33
LHG
B
521 411,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 34
LMG
B
522 311,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 35
LHG
B
523 461,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 36
DGD
B
524 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 37
CLA
C
501 65CHLOROPHYLL A
lig 38
CLA
C
502 65CHLOROPHYLL A
lig 39
CLA
C
503 65CHLOROPHYLL A
lig 40
CLA
C
504 65CHLOROPHYLL A
lig 41
CLA
C
505 65CHLOROPHYLL A
lig 42
CLA
C
506 65CHLOROPHYLL A
lig 43
CLA
C
507 65CHLOROPHYLL A
lig 44
CLA
C
508 65CHLOROPHYLL A
lig 45
CLA
C
509 65CHLOROPHYLL A
lig 46
CLA
C
510 65CHLOROPHYLL A
lig 47
CLA
C
511 51CHLOROPHYLL A
lig 48
CLA
C
512 57CHLOROPHYLL A
lig 49
CLA
C
513 55CHLOROPHYLL A
lig 50
BCR
C
514 40BETA-CAROTENE
lig 51
DGD
C
515 55DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 52
DGD
C
516 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 53
DGD
C
517 60DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 54
LMG
C
518 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 55
CLA
D
401 65CHLOROPHYLL A
lig 56
PHO
D
402 64PHEOPHYTIN A
lig 57
CLA
D
403 65CHLOROPHYLL A
lig 58
CLA
D
404 65CHLOROPHYLL A
lig 59
BCR
D
405 40BETA-CAROTENE
lig 60
PL9
D
406 55 BENZOQUINONE
lig 61
LHG
D
407 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 62
LHG
D
408 431,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 63
LMG
D
409 461,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 64
HEM
E
101 43PROTOPORPHYRIN IX CONTAINING FE
lig 65
BCR
H
101 40BETA-CAROTENE
lig 66
LMG
I
101 401,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 67
BCR
I
102 40BETA-CAROTENE
lig 68
LHG
L
101 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 69
LMG
W
101 481,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 70
LHG
W
102 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE