Analysis of Ligand-Protein Contacts in PDB entry:
9S88


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 9S88. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NDG
I
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 2
G6S
I
2 156-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 3
FUC
I
3 10ALPHA-L-FUCOPYRANOSE
lig 4
NDG
J
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 5
G6S
J
2 156-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 6
FUC
J
3 10ALPHA-L-FUCOPYRANOSE
lig 7
NDG
K
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 8
G6S
K
2 156-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 9
FUC
K
3 10ALPHA-L-FUCOPYRANOSE
lig 10
NDG
L
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 11
G6S
L
2 156-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 12
FUC
L
3 10ALPHA-L-FUCOPYRANOSE
lig 13
NDG
M
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 14
G6S
M
2 156-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 15
FUC
M
3 10ALPHA-L-FUCOPYRANOSE
lig 16
IOD
A
601 1IODIDE ION
lig 17
BR
A
602 1BROMIDE ION
lig 18
CA
A
603 1CALCIUM ION
lig 19
CA
B
601 1CALCIUM ION
lig 20
BR
C
601 1BROMIDE ION
lig 21
CA
C
602 1CALCIUM ION
lig 22
BR
C
603 1BROMIDE ION
lig 23
BR
D
601 1BROMIDE ION
lig 24
CA
D
602 1CALCIUM ION
lig 25
IOD
E
601 1IODIDE ION
lig 26
BR
E
602 1BROMIDE ION
lig 27
BR
E
603 1BROMIDE ION
lig 28
CA
E
604 1CALCIUM ION