Analysis of Ligand-Protein Contacts in PDB entry:
9SMH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 68 ligands in PDB entry 9SMH. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
WYK
B
77 12(2S,4S)-4-HYDROXY-L-ARGININE
lig 3
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 4
FME
H
1 10N-FORMYLMETHIONINE
lig 5
FME
J
1 10N-FORMYLMETHIONINE
lig 6
FME
K
1 10N-FORMYLMETHIONINE
lig 7
FME
L
1 10N-FORMYLMETHIONINE
lig 8
FME
M
1 10N-FORMYLMETHIONINE
lig 9
FME
N
1 10N-FORMYLMETHIONINE
lig 10
ACE
Y
1 3ACETYL GROUP
lig 11
ACE
d
1 3ACETYL GROUP
lig 12
ACE
i
1 3ACETYL GROUP
lig 13
ACE
r
1 3ACETYL GROUP
lig 14
3PE
A
201 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 15
PC1
A
202 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 16
SF4
B
201 8IRON/SULFUR CLUSTER
lig 17
PC1
B
202 461,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 18
3PE
D
901 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 19
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 20
NAI
F
501 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 21
SF4
F
502 8IRON/SULFUR CLUSTER
lig 22
FMN
F
503 31FLAVIN MONONUCLEOTIDE
lig 23
SF4
G
801 8IRON/SULFUR CLUSTER
lig 24
K
G
802 1POTASSIUM ION
lig 25
SF4
G
803 8IRON/SULFUR CLUSTER
lig 26
FES
G
804 4FE2/S2 (INORGANIC) CLUSTER
lig 27
PC1
H
401 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 28
LMT
H
402 35DODECYL-BETA-D-MALTOSIDE
lig 29
3PE
H
403 341,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 30
CDL
H
404 66CARDIOLIPIN
lig 31
PC1
H
405 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 32
PC1
I
201 401,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 33
SF4
I
202 8IRON/SULFUR CLUSTER
lig 34
SF4
I
203 8IRON/SULFUR CLUSTER
lig 35
3PE
I
204 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 36
3PE
K
101 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 37
3PE
L
701 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 38
CDL
L
702 69CARDIOLIPIN
lig 39
3PE
L
703 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 40
3PE
L
704 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 41
CDL
M
501 78CARDIOLIPIN
lig 42
3PE
M
502 431,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 43
PC1
M
503 421,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 44
3PE
N
401 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 45
3PE
N
402 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 46
PC1
N
403 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 47
DGT
O
401 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 48
MG
O
402 1MAGNESIUM ION
lig 49
PC1
P
401 331,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 50
NDP
P
402 48 PHOSPHATE
lig 51
3PE
P
403 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 52
ZN
R
201 1ZINC ION
lig 53
EHZ
T
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 54
EHZ
U
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 55
CDL
X
201 86CARDIOLIPIN
lig 56
3PE
Y
801 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 57
3PE
Y
802 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 58
3PE
Y
803 271,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 59
3PE
d
201 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 60
CDL
d
202 65CARDIOLIPIN
lig 61
CDL
h
201 78CARDIOLIPIN
lig 62
PC1
h
202 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 63
CHD
i
201 29CHOLIC ACID
lig 64
3PE
m
201 391,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 65
MYR
o
201 15MYRISTIC ACID
lig 66
PC1
q
201 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 67
PC1
q
202 491,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 68
CDL
q
203 61CARDIOLIPIN