Analysis of Ligand-Protein Contacts in PDB entry:
9T8Q


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 68 ligands in PDB entry 9T8Q. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
1MG
a
745 241N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 2
PSU
a
746 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 3
5MU
a
747 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 4
PSU
a
955 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 5
5MU
a
1939 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 6
5MC
a
1962 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 7
6MZ
a
2030 23N6-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 8
H2U
a
2449 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 9
MEQ
d
150 10N5-METHYLGLUTAMINE
lig 10
4D4
l
81 12 ACID
lig 11
MS6
l
82 8(2S)-2-AMINO-4-(METHYLSULFANYL)BUTANE-1-TH
lig 12
SR0
a
3001 10N~1~-(3-AZANIUMYLPROPYL)BUTANE-1,4-DIAMINI
lig 13
SR0
a
3002 10N~1~-(3-AZANIUMYLPROPYL)BUTANE-1,4-DIAMINI
lig 14
MG
a
3003 1MAGNESIUM ION
lig 15
MG
a
3004 1MAGNESIUM ION
lig 16
MG
a
3005 1MAGNESIUM ION
lig 17
MG
a
3006 1MAGNESIUM ION
lig 18
MG
a
3007 1MAGNESIUM ION
lig 19
MG
a
3008 1MAGNESIUM ION
lig 20
MG
a
3009 1MAGNESIUM ION
lig 21
MG
a
3010 1MAGNESIUM ION
lig 22
MG
a
3011 1MAGNESIUM ION
lig 23
MG
a
3012 1MAGNESIUM ION
lig 24
MG
a
3013 1MAGNESIUM ION
lig 25
K
a
3014 1POTASSIUM ION
lig 26
K
a
3015 1POTASSIUM ION
lig 27
K
a
3016 1POTASSIUM ION
lig 28
MG
a
3017 1MAGNESIUM ION
lig 29
K
a
3018 1POTASSIUM ION
lig 30
K
a
3019 1POTASSIUM ION
lig 31
MG
a
3020 1MAGNESIUM ION
lig 32
K
a
3021 1POTASSIUM ION
lig 33
K
a
3022 1POTASSIUM ION
lig 34
K
a
3023 1POTASSIUM ION
lig 35
K
a
3024 1POTASSIUM ION
lig 36
MG
a
3025 1MAGNESIUM ION
lig 37
MG
a
3026 1MAGNESIUM ION
lig 38
K
a
3027 1POTASSIUM ION
lig 39
MG
a
3028 1MAGNESIUM ION
lig 40
MG
a
3029 1MAGNESIUM ION
lig 41
MG
a
3030 1MAGNESIUM ION
lig 42
MG
a
3031 1MAGNESIUM ION
lig 43
MG
a
3032 1MAGNESIUM ION
lig 44
MG
a
3033 1MAGNESIUM ION
lig 45
MG
a
3034 1MAGNESIUM ION
lig 46
MG
a
3035 1MAGNESIUM ION
lig 47
MG
a
3036 1MAGNESIUM ION
lig 48
MG
a
3037 1MAGNESIUM ION
lig 49
MG
a
3038 1MAGNESIUM ION
lig 50
MG
a
3039 1MAGNESIUM ION
lig 51
MG
a
3040 1MAGNESIUM ION
lig 52
MG
a
3041 1MAGNESIUM ION
lig 53
MG
a
3042 1MAGNESIUM ION
lig 54
MG
a
3043 1MAGNESIUM ION
lig 55
MG
a
3044 1MAGNESIUM ION
lig 56
K
a
3045 1POTASSIUM ION
lig 57
K
a
3046 1POTASSIUM ION
lig 58
K
a
3047 1POTASSIUM ION
lig 59
K
a
3048 1POTASSIUM ION
lig 60
K
a
3049 1POTASSIUM ION
lig 61
K
a
3050 1POTASSIUM ION
lig 62
K
a
3051 1POTASSIUM ION
lig 63
K
a
3052 1POTASSIUM ION
lig 64
K
a
3053 1POTASSIUM ION
lig 65
K
a
3054 1POTASSIUM ION
lig 66
K
a
3055 1POTASSIUM ION
lig 67
MG
d
301 1MAGNESIUM ION
lig 68
MG
z
101 1MAGNESIUM ION