Analysis of Ligand-Protein Contacts in PDB entry:
9TBD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 66 ligands in PDB entry 9TBD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
FME
B
1 10N-FORMYLMETHIONINE
lig 3
FME
C
1 10N-FORMYLMETHIONINE
lig 4
FME
D
1 10N-FORMYLMETHIONINE
lig 5
FME
E
1 10N-FORMYLMETHIONINE
lig 6
LFA
A
301 10EICOSANE
lig 7
LFA
A
302 10EICOSANE
lig 8
LFA
A
303 12EICOSANE
lig 9
LFA
A
304 7EICOSANE
lig 10
LFA
A
305 7EICOSANE
lig 11
LFA
A
306 5EICOSANE
lig 12
LFA
A
307 6EICOSANE
lig 13
LFA
A
308 10EICOSANE
lig 14
LMT
A
309 35DODECYL-BETA-D-MALTOSIDE
lig 15
LMT
A
310 35DODECYL-BETA-D-MALTOSIDE
lig 16
RET
A
311 20RETINAL
lig 17
LFA
B
301 16EICOSANE
lig 18
LFA
B
302 11EICOSANE
lig 19
LFA
B
303 5EICOSANE
lig 20
LFA
B
304 10EICOSANE
lig 21
LFA
B
305 11EICOSANE
lig 22
LFA
B
306 7EICOSANE
lig 23
LFA
B
307 12EICOSANE
lig 24
LFA
B
308 8EICOSANE
lig 25
LFA
B
309 6EICOSANE
lig 26
LFA
B
310 16EICOSANE
lig 27
LMT
B
311 35DODECYL-BETA-D-MALTOSIDE
lig 28
LMT
B
312 35DODECYL-BETA-D-MALTOSIDE
lig 29
RET
B
313 20RETINAL
lig 30
LFA
B
314 9EICOSANE
lig 31
LFA
C
301 11EICOSANE
lig 32
LFA
C
302 9EICOSANE
lig 33
LFA
C
303 11EICOSANE
lig 34
LFA
C
304 10EICOSANE
lig 35
LFA
C
305 7EICOSANE
lig 36
LFA
C
306 7EICOSANE
lig 37
LFA
C
307 5EICOSANE
lig 38
LFA
C
308 6EICOSANE
lig 39
LMT
C
309 35DODECYL-BETA-D-MALTOSIDE
lig 40
LMT
C
310 35DODECYL-BETA-D-MALTOSIDE
lig 41
RET
C
311 20RETINAL
lig 42
LFA
C
312 16EICOSANE
lig 43
LFA
C
313 10EICOSANE
lig 44
LFA
D
301 16EICOSANE
lig 45
LFA
D
302 5EICOSANE
lig 46
LFA
D
303 10EICOSANE
lig 47
LFA
D
304 12EICOSANE
lig 48
LFA
D
305 10EICOSANE
lig 49
LFA
D
306 7EICOSANE
lig 50
LFA
D
307 7EICOSANE
lig 51
LFA
D
308 6EICOSANE
lig 52
LMT
D
309 35DODECYL-BETA-D-MALTOSIDE
lig 53
LMT
D
310 35DODECYL-BETA-D-MALTOSIDE
lig 54
RET
D
311 20RETINAL
lig 55
LFA
E
301 16EICOSANE
lig 56
LMT
E
302 35DODECYL-BETA-D-MALTOSIDE
lig 57
LFA
E
303 10EICOSANE
lig 58
LFA
E
304 5EICOSANE
lig 59
LFA
E
305 10EICOSANE
lig 60
LFA
E
306 11EICOSANE
lig 61
LFA
E
307 10EICOSANE
lig 62
LFA
E
308 7EICOSANE
lig 63
LFA
E
309 6EICOSANE
lig 64
LFA
E
310 7EICOSANE
lig 65
LMT
E
311 35DODECYL-BETA-D-MALTOSIDE
lig 66
RET
E
312 20RETINAL