Analysis of Ligand-Protein Contacts in PDB entry:
9TDV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 68 ligands in PDB entry 9TDV. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GLC
E
1 11ALPHA-D-GLUCOPYRANOSE
lig 2
GLA
E
2 11ALPHA-D-GALACTOPYRANOSE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
F
8 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 14
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
G
6 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
G
7 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
G
8 11ALPHA-D-MANNOPYRANOSE
lig 19
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
H
6 11ALPHA-D-MANNOPYRANOSE
lig 25
MAN
H
7 11ALPHA-D-MANNOPYRANOSE
lig 26
MAN
H
8 11ALPHA-D-MANNOPYRANOSE
lig 27
GLC
I
1 11ALPHA-D-GLUCOPYRANOSE
lig 28
GLA
I
2 11ALPHA-D-GALACTOPYRANOSE
lig 29
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 32
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 33
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 34
MAN
J
6 11ALPHA-D-MANNOPYRANOSE
lig 35
MAN
J
7 11ALPHA-D-MANNOPYRANOSE
lig 36
MAN
J
8 11ALPHA-D-MANNOPYRANOSE
lig 37
FRU
A
601 12BETA-D-FRUCTOFURANOSE
lig 38
TRS
A
602 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 39
NAG
A
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
A
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
A
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
NAG
A
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
FRU
B
601 12BETA-D-FRUCTOFURANOSE
lig 44
GLC
B
602 11ALPHA-D-GLUCOPYRANOSE
lig 45
GLA
B
603 11ALPHA-D-GALACTOPYRANOSE
lig 46
SO4
B
604 5SULFATE ION
lig 47
NAG
B
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
B
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
B
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
B
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
FRU
C
601 12BETA-D-FRUCTOFURANOSE
lig 52
GLC
C
602 11ALPHA-D-GLUCOPYRANOSE
lig 53
GLA
C
603 11ALPHA-D-GALACTOPYRANOSE
lig 54
TRS
C
604 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 55
SO4
C
605 5SULFATE ION
lig 56
SO4
C
606 5SULFATE ION
lig 57
NAG
C
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
NAG
C
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 59
NAG
C
609 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
C
610 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
FRU
D
601 12BETA-D-FRUCTOFURANOSE
lig 62
TRS
D
602 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 63
SO4
D
603 5SULFATE ION
lig 64
SO4
D
604 5SULFATE ION
lig 65
NAG
D
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
NAG
D
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 67
NAG
D
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
NAG
D
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE