Analysis of Ligand-Protein Contacts in PDB entry:
9TDW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 62 ligands in PDB entry 9TDW. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
E
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
E
7 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
E
8 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
E
9 11ALPHA-D-MANNOPYRANOSE
lig 10
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 13
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
F
8 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
F
9 11ALPHA-D-MANNOPYRANOSE
lig 19
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
G
6 11ALPHA-D-MANNOPYRANOSE
lig 25
MAN
G
7 11ALPHA-D-MANNOPYRANOSE
lig 26
MAN
G
8 11ALPHA-D-MANNOPYRANOSE
lig 27
MAN
G
9 11ALPHA-D-MANNOPYRANOSE
lig 28
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 31
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 32
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 33
MAN
H
6 11ALPHA-D-MANNOPYRANOSE
lig 34
MAN
H
7 11ALPHA-D-MANNOPYRANOSE
lig 35
MAN
H
8 11ALPHA-D-MANNOPYRANOSE
lig 36
MAN
H
9 11ALPHA-D-MANNOPYRANOSE
lig 37
FRU
A
601 12BETA-D-FRUCTOFURANOSE
lig 38
NAG
A
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
A
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
A
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
A
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
SO4
A
606 5SULFATE ION
lig 43
FRU
B
601 12BETA-D-FRUCTOFURANOSE
lig 44
SO4
B
602 5SULFATE ION
lig 45
NAG
B
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
B
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
B
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
B
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
FRU
C
601 12BETA-D-FRUCTOFURANOSE
lig 50
SO4
C
602 5SULFATE ION
lig 51
NAG
C
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
C
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
C
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
C
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
SO4
C
607 5SULFATE ION
lig 56
SO4
C
608 5SULFATE ION
lig 57
FRU
D
601 12BETA-D-FRUCTOFURANOSE
lig 58
SO4
D
602 5SULFATE ION
lig 59
NAG
D
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
D
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
NAG
D
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
NAG
D
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE