Analysis of Ligand-Protein Contacts in PDB entry:
9UB1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 48 ligands in PDB entry 9UB1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
M
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
M
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
M
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
M
7 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
M
8 11ALPHA-D-MANNOPYRANOSE
lig 9
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
N
6 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
N
7 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
N
8 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 20
MAN
O
4 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
O
5 11ALPHA-D-MANNOPYRANOSE
lig 22
MAN
O
6 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
O
7 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
O
8 11ALPHA-D-MANNOPYRANOSE
lig 25
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 28
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 29
MAN
P
5 11ALPHA-D-MANNOPYRANOSE
lig 30
MAN
P
6 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
P
7 11ALPHA-D-MANNOPYRANOSE
lig 32
MAN
P
8 11ALPHA-D-MANNOPYRANOSE
lig 33
NAG
A
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
A
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
A
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
CA
A
504 1CALCIUM ION
lig 37
NAG
B
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
B
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
B
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
CA
B
504 1CALCIUM ION
lig 41
NAG
C
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
NAG
C
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
NAG
C
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
CA
C
504 1CALCIUM ION
lig 45
NAG
D
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
D
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
D
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
CA
D
504 1CALCIUM ION