Analysis of Ligand-Protein Contacts in PDB entry:
9VBY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 9VBY. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BMA
b
1 12BETA-D-MANNOPYRANOSE
lig 2
MAN
b
2 11ALPHA-D-MANNOPYRANOSE
lig 3
NAG
b
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
BMA
a
1 12BETA-D-MANNOPYRANOSE
lig 5
MAN
a
2 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
a
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
c
1 12BETA-D-MANNOPYRANOSE
lig 8
MAN
c
2 11ALPHA-D-MANNOPYRANOSE
lig 9
NAG
c
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
d
1 12BETA-D-MANNOPYRANOSE
lig 11
MAN
d
2 11ALPHA-D-MANNOPYRANOSE
lig 12
NAG
d
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
CA
A
301 1CALCIUM ION
lig 14
MN
A
302 1MANGANESE (II) ION
lig 15
CA
B
301 1CALCIUM ION
lig 16
MN
B
302 1MANGANESE (II) ION
lig 17
CA
C
301 1CALCIUM ION
lig 18
MN
C
302 1MANGANESE (II) ION
lig 19
CA
D
301 1CALCIUM ION
lig 20
MN
D
302 1MANGANESE (II) ION