Analysis of Ligand-Protein Contacts in PDB entry:
9VC0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 9VC0. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BMA
a
1 12BETA-D-MANNOPYRANOSE
lig 2
MAN
a
2 11ALPHA-D-MANNOPYRANOSE
lig 3
BMA
b
1 12BETA-D-MANNOPYRANOSE
lig 4
MAN
b
2 11ALPHA-D-MANNOPYRANOSE
lig 5
BMA
c
1 12BETA-D-MANNOPYRANOSE
lig 6
MAN
c
2 11ALPHA-D-MANNOPYRANOSE
lig 7
BMA
d
1 12BETA-D-MANNOPYRANOSE
lig 8
MAN
d
2 11ALPHA-D-MANNOPYRANOSE
lig 9
CA
A
301 1CALCIUM ION
lig 10
MN
A
302 1MANGANESE (II) ION
lig 11
CA
B
301 1CALCIUM ION
lig 12
MN
B
302 1MANGANESE (II) ION
lig 13
CA
D
301 1CALCIUM ION
lig 14
MN
D
302 1MANGANESE (II) ION
lig 15
CA
C
301 1CALCIUM ION
lig 16
MN
C
302 1MANGANESE (II) ION