Analysis of Ligand-Protein Contacts in PDB entry:
9VDO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 9VDO. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DCP
A
601 282'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
lig 2
MN
A
602 1MANGANESE (II) ION
lig 3
MN
A
603 1MANGANESE (II) ION
lig 4
DCP
B
601 282'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
lig 5
MN
B
602 1MANGANESE (II) ION
lig 6
MN
B
603 1MANGANESE (II) ION
lig 7
DCP
D
601 282'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
lig 8
MN
D
602 1MANGANESE (II) ION
lig 9
MN
D
603 1MANGANESE (II) ION
lig 10
DCP
F
601 282'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
lig 11
MN
F
602 1MANGANESE (II) ION
lig 12
MN
F
603 1MANGANESE (II) ION
lig 13
DCP
H
601 282'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
lig 14
MN
H
602 1MANGANESE (II) ION
lig 15
MN
H
603 1MANGANESE (II) ION
lig 16
DCP
K
601 282'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
lig 17
MN
K
602 1MANGANESE (II) ION
lig 18
MN
K
603 1MANGANESE (II) ION