Analysis of Ligand-Protein Contacts in PDB entry:
9VDT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 9VDT. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NA
A
1301 1SODIUM ION
lig 2
NA
A
1302 1SODIUM ION
lig 3
1N7
A
1303 32CHAPSO
lig 4
LMT
A
1304 35DODECYL-BETA-D-MALTOSIDE
lig 5
PX4
A
1305 461,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLIN
lig 6
PX4
A
1306 461,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLIN
lig 7
PX4
A
1307 461,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLIN
lig 8
PX4
A
1308 461,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLIN
lig 9
PX4
A
1309 451,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLIN
lig 10
PX4
A
1310 461,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLIN
lig 11
PX4
A
1311 461,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLIN
lig 12
PX4
A
1312 461,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLIN