Analysis of Ligand-Protein Contacts in PDB entry:
9VNA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 9VNA. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
Y01
B
1201 35CHOLESTEROL HEMISUCCINATE
lig 2
CA
B
1202 1CALCIUM ION
lig 3
CLR
B
1203 28CHOLESTEROL
lig 4
CLR
A
1201 28CHOLESTEROL
lig 5
Y01
A
1202 35CHOLESTEROL HEMISUCCINATE
lig 6
CA
A
1203 1CALCIUM ION
lig 7
Y01
C
1201 35CHOLESTEROL HEMISUCCINATE
lig 8
CA
C
1202 1CALCIUM ION
lig 9
CLR
C
1203 28CHOLESTEROL
lig 10
CLR
D
1201 28CHOLESTEROL
lig 11
Y01
D
1202 35CHOLESTEROL HEMISUCCINATE
lig 12
CA
D
1203 1CALCIUM ION