Analysis of Ligand-Protein Contacts in PDB entry:
9VP9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 9VP9. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BGC
C
1 12BETA-D-GLUCOPYRANOSE
lig 2
BGC
C
2 11BETA-D-GLUCOPYRANOSE
lig 3
EDO
A
401 41,2-ETHANEDIOL
lig 4
ACT
A
402 4ACETATE ION
lig 5
ACT
A
403 4ACETATE ION
lig 6
EDO
A
404 41,2-ETHANEDIOL
lig 7
ACT
A
405 4ACETATE ION
lig 8
GOL
A
406 6GLYCEROL
lig 9
GOL
A
407 6GLYCEROL
lig 10
GOL
A
408 6GLYCEROL
lig 11
EDO
A
409 41,2-ETHANEDIOL
lig 12
PGE
A
410 10TRIETHYLENE GLYCOL
lig 13
CA
A
411 1CALCIUM ION
lig 14
CL
A
412 1CHLORIDE ION
lig 15
NA
A
413 1SODIUM ION
lig 16
NA
A
414 1SODIUM ION
lig 17
NA
A
415 1SODIUM ION
lig 18
NA
A
416 1SODIUM ION
lig 19
NA
A
417 1SODIUM ION
lig 20
NA
A
418 1SODIUM ION
lig 21
NA
A
419 1SODIUM ION