Analysis of Ligand-Protein Contacts in PDB entry:
9VYL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 40 ligands in PDB entry 9VYL. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAD
A
301 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 2
SPD
A
302 10SPERMIDINE
lig 3
SPD
A
303 10SPERMIDINE
lig 4
ZN
A
304 1ZINC ION
lig 5
NA
A
305 1SODIUM ION
lig 6
NA
A
306 1SODIUM ION
lig 7
NA
A
307 1SODIUM ION
lig 8
NA
A
308 1SODIUM ION
lig 9
NA
A
309 1SODIUM ION
lig 10
NA
A
310 1SODIUM ION
lig 11
NAD
B
301 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 12
SPD
B
302 10SPERMIDINE
lig 13
SPD
B
303 10SPERMIDINE
lig 14
ZN
B
304 1ZINC ION
lig 15
NA
B
305 1SODIUM ION
lig 16
NA
B
306 1SODIUM ION
lig 17
NA
B
307 1SODIUM ION
lig 18
NA
B
308 1SODIUM ION
lig 19
NA
B
309 1SODIUM ION
lig 20
NA
B
310 1SODIUM ION
lig 21
NAD
C
301 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 22
SPD
C
302 10SPERMIDINE
lig 23
SPD
C
303 10SPERMIDINE
lig 24
ZN
C
304 1ZINC ION
lig 25
NA
C
305 1SODIUM ION
lig 26
NA
C
306 1SODIUM ION
lig 27
NA
C
307 1SODIUM ION
lig 28
NA
C
308 1SODIUM ION
lig 29
NA
C
309 1SODIUM ION
lig 30
NA
C
310 1SODIUM ION
lig 31
NAD
D
301 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 32
SPD
D
302 10SPERMIDINE
lig 33
SPD
D
303 10SPERMIDINE
lig 34
ZN
D
304 1ZINC ION
lig 35
NA
D
305 1SODIUM ION
lig 36
NA
D
306 1SODIUM ION
lig 37
NA
D
307 1SODIUM ION
lig 38
NA
D
308 1SODIUM ION
lig 39
NA
D
309 1SODIUM ION
lig 40
NA
D
310 1SODIUM ION