Analysis of Ligand-Protein Contacts in PDB entry:
9W2U


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 62 ligands in PDB entry 9W2U. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
J
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
ACE
t
0 3ACETYL GROUP
lig 4
ACE
u
0 3ACETYL GROUP
lig 5
ACE
v
0 3ACETYL GROUP
lig 6
FME
A
201 10N-FORMYLMETHIONINE
lig 7
PC1
A
202 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 8
SF4
B
201 8IRON/SULFUR CLUSTER
lig 9
PC1
B
202 461,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 10
PC1
B
203 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 11
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 12
FMN
F
501 31FLAVIN MONONUCLEOTIDE
lig 13
SF4
F
502 8IRON/SULFUR CLUSTER
lig 14
SF4
G
801 8IRON/SULFUR CLUSTER
lig 15
SF4
G
802 8IRON/SULFUR CLUSTER
lig 16
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 17
K
G
804 1POTASSIUM ION
lig 18
FME
H
401 10N-FORMYLMETHIONINE
lig 19
3PE
H
402 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 20
PC1
H
403 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 21
PC1
I
201 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 22
SF4
I
202 8IRON/SULFUR CLUSTER
lig 23
SF4
I
203 8IRON/SULFUR CLUSTER
lig 24
FME
K
101 10N-FORMYLMETHIONINE
lig 25
3PE
K
102 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 26
FME
L
701 10N-FORMYLMETHIONINE
lig 27
3PE
L
702 461,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 28
CDL
L
703 76CARDIOLIPIN
lig 29
3PE
L
704 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 30
PC1
L
705 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 31
CHD
L
706 29CHOLIC ACID
lig 32
FME
M
501 10N-FORMYLMETHIONINE
lig 33
3PE
M
502 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 34
PC1
M
503 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 35
3PE
M
504 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 36
3PE
M
505 501,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 37
FME
N
401 10N-FORMYLMETHIONINE
lig 38
3PE
O
401 481,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 39
CDL
O
402 62CARDIOLIPIN
lig 40
GTP
O
403 32GUANOSINE-5'-TRIPHOSPHATE
lig 41
MG
O
404 1MAGNESIUM ION
lig 42
NDP
P
501 48 PHOSPHATE
lig 43
ZN
R
201 1ZINC ION
lig 44
3PE
t
801 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 45
3PE
t
802 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 46
3PE
t
803 301,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 47
3PE
t
804 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 48
3PE
t
805 271,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 49
PC1
Z
201 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 50
3PE
b
201 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 51
CDL
d
201 86CARDIOLIPIN
lig 52
3PE
d
202 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 53
PC1
d
203 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 54
CDL
d
204 65CARDIOLIPIN
lig 55
CDL
h
201 80CARDIOLIPIN
lig 56
PC1
h
202 471,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 57
3PE
u
201 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 58
3PE
j
101 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 59
PC1
m
201 461,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 60
3PE
m
202 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 61
MYR
o
201 15MYRISTIC ACID
lig 62
CDL
v
201 61CARDIOLIPIN