Analysis of Ligand-Protein Contacts in PDB entry:
9W2V


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 61 ligands in PDB entry 9W2V. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 2
FME
H
1 10N-FORMYLMETHIONINE
lig 3
FME
J
1 10N-FORMYLMETHIONINE
lig 4
FME
K
1 10N-FORMYLMETHIONINE
lig 5
ACE
u
0 3ACETYL GROUP
lig 6
ACE
v
0 3ACETYL GROUP
lig 7
FME
A
201 10N-FORMYLMETHIONINE
lig 8
3PE
A
202 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 9
PC1
A
203 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 10
PC1
A
204 331,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 11
SF4
B
201 8IRON/SULFUR CLUSTER
lig 12
PC1
B
202 461,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 13
PC1
B
203 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 14
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 15
SF4
F
501 8IRON/SULFUR CLUSTER
lig 16
FMN
F
502 31FLAVIN MONONUCLEOTIDE
lig 17
SF4
G
801 8IRON/SULFUR CLUSTER
lig 18
SF4
G
802 8IRON/SULFUR CLUSTER
lig 19
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 20
K
G
804 1POTASSIUM ION
lig 21
PC1
H
401 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 22
3PE
H
402 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 23
CDL
H
403 51CARDIOLIPIN
lig 24
PC1
H
404 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 25
PC1
I
201 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 26
SF4
I
202 8IRON/SULFUR CLUSTER
lig 27
SF4
I
203 8IRON/SULFUR CLUSTER
lig 28
PC1
I
204 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 29
3PE
K
101 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 30
FME
L
701 10N-FORMYLMETHIONINE
lig 31
CDL
L
702 76CARDIOLIPIN
lig 32
3PE
L
703 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 33
3PE
L
704 461,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 34
3PE
L
705 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 35
FME
M
501 10N-FORMYLMETHIONINE
lig 36
CDL
M
502 86CARDIOLIPIN
lig 37
PC1
M
503 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 38
3PE
M
504 501,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 39
3PE
N
401 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 40
FME
N
402 10N-FORMYLMETHIONINE
lig 41
3PE
O
401 481,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 42
3PE
O
402 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 43
MG
O
403 1MAGNESIUM ION
lig 44
GTP
O
404 32GUANOSINE-5'-TRIPHOSPHATE
lig 45
NDP
P
501 48 PHOSPHATE
lig 46
3PE
P
502 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 47
ZN
R
201 1ZINC ION
lig 48
PC1
Y
201 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 49
3PE
Y
202 271,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 50
3PE
Y
203 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 51
3PE
Y
204 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 52
3PE
Y
205 301,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 53
3PE
Y
206 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 54
PC1
d
201 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 55
3PE
d
202 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 56
CDL
d
203 65CARDIOLIPIN
lig 57
CDL
h
201 80CARDIOLIPIN
lig 58
3PE
j
101 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 59
PC1
m
201 461,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 60
3PE
m
202 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 61
CDL
v
201 61CARDIOLIPIN