Analysis of Ligand-Protein Contacts in PDB entry:
9WBT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 75 ligands in PDB entry 9WBT. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
43 10PHOSPHOSERINE
lig 2
SEP
B
43 10PHOSPHOSERINE
lig 3
SEP
E
43 10PHOSPHOSERINE
lig 4
SEP
F
43 10PHOSPHOSERINE
lig 5
SEP
H
43 10PHOSPHOSERINE
lig 6
SEP
J
43 10PHOSPHOSERINE
lig 7
SEP
M
43 10PHOSPHOSERINE
lig 8
HEZ
A
601 8HEXANE-1,6-DIOL
lig 9
HEZ
A
602 8HEXANE-1,6-DIOL
lig 10
MG
A
603 1MAGNESIUM ION
lig 11
BME
A
604 4BETA-MERCAPTOETHANOL
lig 12
BME
A
605 4BETA-MERCAPTOETHANOL
lig 13
BME
A
606 4BETA-MERCAPTOETHANOL
lig 14
BME
A
607 4BETA-MERCAPTOETHANOL
lig 15
HEZ
B
601 8HEXANE-1,6-DIOL
lig 16
HEZ
B
602 8HEXANE-1,6-DIOL
lig 17
BME
B
603 4BETA-MERCAPTOETHANOL
lig 18
BME
B
604 4BETA-MERCAPTOETHANOL
lig 19
BME
B
605 4BETA-MERCAPTOETHANOL
lig 20
BME
B
606 4BETA-MERCAPTOETHANOL
lig 21
HEZ
C
601 8HEXANE-1,6-DIOL
lig 22
HEZ
C
602 8HEXANE-1,6-DIOL
lig 23
BME
C
603 4BETA-MERCAPTOETHANOL
lig 24
BME
C
604 4BETA-MERCAPTOETHANOL
lig 25
BME
C
605 4BETA-MERCAPTOETHANOL
lig 26
BME
C
606 4BETA-MERCAPTOETHANOL
lig 27
HEZ
D
601 8HEXANE-1,6-DIOL
lig 28
HEZ
D
602 8HEXANE-1,6-DIOL
lig 29
MG
D
603 1MAGNESIUM ION
lig 30
BME
D
604 4BETA-MERCAPTOETHANOL
lig 31
BME
D
605 4BETA-MERCAPTOETHANOL
lig 32
HEZ
E
601 8HEXANE-1,6-DIOL
lig 33
HEZ
E
602 8HEXANE-1,6-DIOL
lig 34
HEZ
E
603 8HEXANE-1,6-DIOL
lig 35
MG
E
604 1MAGNESIUM ION
lig 36
BME
E
605 4BETA-MERCAPTOETHANOL
lig 37
BME
E
606 4BETA-MERCAPTOETHANOL
lig 38
BME
E
607 4BETA-MERCAPTOETHANOL
lig 39
BME
E
608 4BETA-MERCAPTOETHANOL
lig 40
HEZ
F
601 8HEXANE-1,6-DIOL
lig 41
HEZ
F
602 8HEXANE-1,6-DIOL
lig 42
MG
F
603 1MAGNESIUM ION
lig 43
BME
F
604 4BETA-MERCAPTOETHANOL
lig 44
TAM
G
601 11TRIS(HYDROXYETHYL)AMINOMETHANE
lig 45
HEZ
G
602 8HEXANE-1,6-DIOL
lig 46
MG
G
603 1MAGNESIUM ION
lig 47
BME
G
604 4BETA-MERCAPTOETHANOL
lig 48
BME
G
605 4BETA-MERCAPTOETHANOL
lig 49
BME
G
606 4BETA-MERCAPTOETHANOL
lig 50
BME
G
607 4BETA-MERCAPTOETHANOL
lig 51
HEZ
H
601 8HEXANE-1,6-DIOL
lig 52
HEZ
H
602 8HEXANE-1,6-DIOL
lig 53
MG
H
603 1MAGNESIUM ION
lig 54
BME
H
604 4BETA-MERCAPTOETHANOL
lig 55
BME
H
605 4BETA-MERCAPTOETHANOL
lig 56
TAM
I
601 11TRIS(HYDROXYETHYL)AMINOMETHANE
lig 57
HEZ
I
602 8HEXANE-1,6-DIOL
lig 58
HEZ
I
603 8HEXANE-1,6-DIOL
lig 59
BME
I
604 4BETA-MERCAPTOETHANOL
lig 60
BME
I
605 4BETA-MERCAPTOETHANOL
lig 61
TAM
J
601 11TRIS(HYDROXYETHYL)AMINOMETHANE
lig 62
HEZ
J
602 8HEXANE-1,6-DIOL
lig 63
BME
J
603 4BETA-MERCAPTOETHANOL
lig 64
BME
J
604 4BETA-MERCAPTOETHANOL
lig 65
BME
J
605 4BETA-MERCAPTOETHANOL
lig 66
HEZ
K
601 8HEXANE-1,6-DIOL
lig 67
BME
K
602 4BETA-MERCAPTOETHANOL
lig 68
HEZ
L
601 8HEXANE-1,6-DIOL
lig 69
BME
L
602 4BETA-MERCAPTOETHANOL
lig 70
HEZ
M
601 8HEXANE-1,6-DIOL
lig 71
BME
M
602 4BETA-MERCAPTOETHANOL
lig 72
HEZ
N
601 8HEXANE-1,6-DIOL
lig 73
MG
N
602 1MAGNESIUM ION
lig 74
BME
N
603 4BETA-MERCAPTOETHANOL
lig 75
BME
N
604 4BETA-MERCAPTOETHANOL