Analysis of Ligand-Protein Contacts in PDB entry:
9Y4T


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 9Y4T. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
AJP
A
4001 42DIGITONIN
lig 2
CLR
A
4002 28CHOLESTEROL
lig 3
CLR
A
4003 28CHOLESTEROL
lig 4
CLR
A
4004 28CHOLESTEROL
lig 5
P5S
A
4005 22 PROPYL]OXY}(HYDROXY)PHOSPHORYL]-L-SERINE
lig 6
P5S
A
4006 43 PROPYL]OXY}(HYDROXY)PHOSPHORYL]-L-SERINE
lig 7
CLR
A
4007 28CHOLESTEROL
lig 8
PTY
A
4008 30PHOSPHATIDYLETHANOLAMINE
lig 9
OLA
A
4009 20OLEIC ACID
lig 10
MYS
A
4010 15PENTADECANE
lig 11
PLM
A
4011 18PALMITIC ACID
lig 12
D12
A
4012 12DODECANE
lig 13
CLR
A
4013 28CHOLESTEROL
lig 14
CLR
A
4014 28CHOLESTEROL
lig 15
CLR
A
4015 28CHOLESTEROL
lig 16
CLR
A
4016 28CHOLESTEROL
lig 17
CLR
A
4017 28CHOLESTEROL
lig 18
AJP
A
4018 32DIGITONIN
lig 19
CLR
A
4019 28CHOLESTEROL
lig 20
CPL
A
4020 341-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSP
lig 21
PTY
A
4021 23PHOSPHATIDYLETHANOLAMINE
lig 22
OCT
A
4022 8N-OCTANE
lig 23
D12
A
4023 5DODECANE
lig 24
HEX
A
4024 6HEXANE
lig 25
ATP
A
4025 31ADENOSINE-5'-TRIPHOSPHATE
lig 26
MG
A
4026 1MAGNESIUM ION
lig 27
ATP
A
4027 31ADENOSINE-5'-TRIPHOSPHATE
lig 28
MG
A
4028 1MAGNESIUM ION
lig 29
VX8
A
4029 33LUMACAFTOR