Analysis of Ligand-Protein Contacts in PDB entry:
9Y9D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 46 ligands in PDB entry 9Y9D. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
ATP
A
901 31ADENOSINE-5'-TRIPHOSPHATE
lig 18
MG
A
902 1MAGNESIUM ION
lig 19
MG
A
903 1MAGNESIUM ION
lig 20
MG
A
904 1MAGNESIUM ION
lig 21
MG
A
905 1MAGNESIUM ION
lig 22
NA
A
906 1SODIUM ION
lig 23
NA
A
907 1SODIUM ION
lig 24
NAG
A
908 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
ATP
B
901 31ADENOSINE-5'-TRIPHOSPHATE
lig 26
MG
B
902 1MAGNESIUM ION
lig 27
MG
B
903 1MAGNESIUM ION
lig 28
MG
B
904 1MAGNESIUM ION
lig 29
MG
B
905 1MAGNESIUM ION
lig 30
NA
B
906 1SODIUM ION
lig 31
NAG
B
907 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
ATP
C
901 31ADENOSINE-5'-TRIPHOSPHATE
lig 33
MG
C
902 1MAGNESIUM ION
lig 34
MG
C
903 1MAGNESIUM ION
lig 35
MG
C
904 1MAGNESIUM ION
lig 36
MG
C
905 1MAGNESIUM ION
lig 37
NA
C
906 1SODIUM ION
lig 38
NA
C
907 1SODIUM ION
lig 39
NAG
C
908 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
ATP
D
901 31ADENOSINE-5'-TRIPHOSPHATE
lig 41
MG
D
902 1MAGNESIUM ION
lig 42
MG
D
903 1MAGNESIUM ION
lig 43
MG
D
904 1MAGNESIUM ION
lig 44
MG
D
905 1MAGNESIUM ION
lig 45
NA
D
906 1SODIUM ION
lig 46
NAG
D
907 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE