Analysis of Ligand-Protein Contacts in PDB entry:
9YD3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 9YD3. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
LCC
A
1 19 PHOSPHATE
lig 2
LCC
A
2 22 PHOSPHATE
lig 3
LCC
A
3 22 PHOSPHATE
lig 4
LCG
A
4 24 PHOSPHATE
lig 5
LCC
B
1 19 PHOSPHATE
lig 6
LCC
B
2 22 PHOSPHATE
lig 7
LCC
B
3 22 PHOSPHATE
lig 8
LCG
B
4 24 PHOSPHATE
lig 9
EQ4
A
101 29 PHOSPHORYL]GUANOSINE
lig 10
MG
A
102 1MAGNESIUM ION
lig 11
MG
A
103 1MAGNESIUM ION
lig 12
MG
A
104 1MAGNESIUM ION
lig 13
MG
A
105 1MAGNESIUM ION
lig 14
MG
A
106 1MAGNESIUM ION
lig 15
EQ4
B
101 29 PHOSPHORYL]GUANOSINE
lig 16
MG
B
102 1MAGNESIUM ION
lig 17
MG
B
103 1MAGNESIUM ION
lig 18
MG
B
104 1MAGNESIUM ION
lig 19
MG
B
105 1MAGNESIUM ION