Analysis of Ligand-Protein Contacts in PDB entry:
9YER


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 23 ligands in PDB entry 9YER. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 9
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 17
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 18
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 21
ACH
A
501 10ACETYLCHOLINE
lig 22
ACH
C
501 10ACETYLCHOLINE
lig 23
NAG
B
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE