Analysis of Ligand-Protein Contacts in PDB entry:
9YK4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 9YK4. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HEM
A
601 43PROTOPORPHYRIN IX CONTAINING FE
lig 2
IMD
A
602 5IMIDAZOLE
lig 3
PG4
A
603 13TETRAETHYLENE GLYCOL
lig 4
PG4
A
604 13TETRAETHYLENE GLYCOL
lig 5
GOL
A
605 6GLYCEROL
lig 6
GOL
A
606 6GLYCEROL
lig 7
GOL
A
607 6GLYCEROL
lig 8
GOL
A
608 6GLYCEROL
lig 9
EDO
A
609 41,2-ETHANEDIOL
lig 10
EDO
A
610 41,2-ETHANEDIOL
lig 11
EDO
A
611 41,2-ETHANEDIOL
lig 12
EDO
A
612 41,2-ETHANEDIOL
lig 13
EDO
A
613 41,2-ETHANEDIOL
lig 14
EDO
A
614 41,2-ETHANEDIOL
lig 15
EDO
A
615 41,2-ETHANEDIOL
lig 16
EDO
A
616 41,2-ETHANEDIOL
lig 17
EDO
A
617 41,2-ETHANEDIOL
lig 18
EDO
A
618 41,2-ETHANEDIOL
lig 19
EDO
A
619 41,2-ETHANEDIOL
lig 20
EDO
A
620 41,2-ETHANEDIOL
lig 21
EDO
A
621 41,2-ETHANEDIOL
lig 22
EDO
A
622 41,2-ETHANEDIOL