Analysis of Ligand-Protein Contacts in PDB entry:
9YXQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 9YXQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
1
501 1MAGNESIUM ION
lig 2
GTP
1
502 32GUANOSINE-5'-TRIPHOSPHATE
lig 3
GDP
2
501 28GUANOSINE-5'-DIPHOSPHATE
lig 4
TA1
2
502 62TAXOL
lig 5
GTP
3
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 6
MG
3
502 1MAGNESIUM ION
lig 7
GDP
4
501 28GUANOSINE-5'-DIPHOSPHATE
lig 8
MG
4
502 1MAGNESIUM ION
lig 9
TA1
4
503 62TAXOL
lig 10
GDP
5
501 28GUANOSINE-5'-DIPHOSPHATE
lig 11
MG
5
502 1MAGNESIUM ION
lig 12
TA1
5
503 62TAXOL
lig 13
GTP
6
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 14
MG
6
502 1MAGNESIUM ION
lig 15
GDP
7
501 28GUANOSINE-5'-DIPHOSPHATE
lig 16
MG
7
502 1MAGNESIUM ION
lig 17
TA1
7
503 62TAXOL
lig 18
GTP
8
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 19
MG
8
502 1MAGNESIUM ION
lig 20
GTP
A
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 21
MG
A
502 1MAGNESIUM ION
lig 22
GDP
B
501 28GUANOSINE-5'-DIPHOSPHATE
lig 23
MG
B
502 1MAGNESIUM ION
lig 24
TA1
B
503 62TAXOL
lig 25
GTP
a
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 26
MG
a
502 1MAGNESIUM ION
lig 27
MG
a
503 1MAGNESIUM ION
lig 28
TA1
b
501 62TAXOL
lig 29
GDP
b
502 28GUANOSINE-5'-DIPHOSPHATE