1QD2 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ADE enzyme
related structures by homologous chain: 1GIU, 1NLI
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


  • Primary referenceCrystal structures of the complexes of trichosanthin with four substrate analogs and catalytic mechanism of RNA N-glycosidase., Gu YJ, Xia ZX, Proteins 2000 Apr 1;39(1):37-46. PMID:10737925
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (1qd2.pdb1.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 1QD2
  • CSU: Contacts of Structural Units for 1QD2
  • Likely Quarternary Molecular Structure file(s) for 1QD2
  • Structure Factors (163 Kb)
  • Retrieve 1QD2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QD2 from S2C, [Save to disk]
  • Re-refined 1qd2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1QD2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qd2] [1qd2_A]
  • SWISS-PROT database: [P09989]

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science