5LKS	Ribosome	date	6-0 20, 1998
authors	A.G.Myasnikov, S.K.Natchiar, M.Nebout, I.Hazemann, V.Imbert, H.Khatter, J.F.Peyron, B.P.Klaholz
compound		source
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component LA LB LC LD LE LF LG LH LI LJ LL LM LN LO LP LQ LR LS LT LU LV LW LX LY LZ La Lb Lc Ld Le Lf Lg Lh Li Lj Lk Ll Lm intracellular transport of v... Ln Lo cytosolic large ribosomal su... Lp Lr Lz SA virus receptor activity cytosolic small ribosomal su... SB cytosolic small ribosomal su... SC cytosolic small ribosomal su... SD cytosolic small ribosomal su... SE ribosome cytosolic small ribosomal su... SF cytosolic small ribosomal su... SG cytosolic small ribosomal su... SH cytosolic small ribosomal su... SI cytosolic small ribosomal su... SJ cytosolic small ribosomal su... SK cytosolic small ribosomal su... SL cytosolic small ribosomal su... SM cytosolic small ribosomal su... SN cytosolic small ribosomal su... SO translation regulator activi... cytosolic small ribosomal su... SP cytosolic small ribosomal su... SQ cytosolic small ribosomal su... SR cytosolic small ribosomal su... SS small ribosomal subunit cytosolic small ribosomal su... ST cytosolic small ribosomal su... SU cytosolic small ribosomal su... SV cytosolic small ribosomal su... SW cytosolic small ribosomal su... SX cytosolic small ribosomal su... SY small ribosomal subunit cytosolic small ribosomal su... SZ small ribosomal subunit cytosolic small ribosomal su... Sa small ribosomal subunit cytosolic small ribosomal su... Sb cytosolic small ribosomal su... Sc small ribosomal subunit cytosolic small ribosomal su... Sd small ribosomal subunit cytosolic small ribosomal su... Se Sf intracellular transport of v... small ribosomal subunit cytosolic small ribosomal su... Sg protein tyrosine kinase inhi...
Primary reference	Structure-function insights reveal the human ribosome as a cancer target for antibiotics., Myasnikov AG, Kundhavai Natchiar S, Nebout M, Hazemann I, Imbert V, Khatter H, Peyron JF, Klaholz BP, Nat Commun. 2016 Sep 26;7:12856. doi: 10.1038/ncomms12856. PMID:27665925

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1925 Kb) [Save to disk] CSU: Contacts of Structural Units for 5LKS Retrieve 5LKS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5LKS from S2C, [Save to disk]

View 5LKS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5LKS

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5lks_SN] [5lks_LR] [5lks_Sa] [5lks_SP] [5lks_LV] [5lks_LU] [5lks_LS] [5lks_LY] [5lks_LQ] [5lks_SH] [5lks_Sb] [5lks_L8] [5lks_Lh] [5lks_LA] [5lks_Lj] [5lks_LC] [5lks_SD] [5lks_LF] [5lks_LE] [5lks_Sf] [5lks_Lm] [5lks_SS] [5lks_SU] [5lks_Lz] [5lks_LN] [5lks_LZ] [5lks_L7] [5lks_SJ] [5lks_Lo] [5lks_SI] [5lks_LJ] [5lks_LG] [5lks_LL] [5lks_Ll] [5lks_LM] [5lks_SF] [5lks_SM] [5lks_LW] [5lks_LO] [5lks_Lp] [5lks_Sg] [5lks_Sc] [5lks_Sd] [5lks_SQ] [5lks_Li] [5lks_Lr] [5lks_Se] [5lks_Lc] [5lks_Le] [5lks_LD] [5lks_SC] [5lks_ST] [5lks_SY] [5lks_SL] [5lks_Lg] [5lks_LT] [5lks_S2] [5lks_SX] [5lks_Lk] [5lks_LI] [5lks_SO] [5lks_La] [5lks_SW] [5lks_Ld] [5lks_Lf] [5lks_L5] [5lks_SB] [5lks_Lb] [5lks_SA] [5lks] [5lks_LX] [5lks_SE] [5lks_LH] [5lks_Ln] [5lks_SG] [5lks_LB] [5lks_LP] [5lks_SR] [5lks_SV] [5lks_SK] [5lks_SZ] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5LKS

Community annotation for 5LKS at PDBWiki (http://pdbwiki.org)

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