5YZG		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component 1 catalytic step 2 spliceosome... 2 catalytic step 2 spliceosome... 3 A metallopeptidase activity isopeptidase activity catalytic step 2 spliceosome... C D U5 snRNP catalytic step 2 spliceosome... E catalytic step 2 spliceosome... I transcription, DNA-templated... catalytic step 2 spliceosome... J catalytic step 2 spliceosome... K L catalytic step 2 spliceosome... M catalytic step 2 spliceosome... N ligand-dependent nuclear rec... O catalytic step 2 spliceosome... P catalytic step 2 spliceosome... Q catalytic step 2 spliceosome... R catalytic step 2 spliceosome... S catalytic step 2 spliceosome... T catalytic step 2 spliceosome... U catalytic step 2 spliceosome... V spliceosomal complex catalytic step 2 spliceosome... W catalytic step 2 spliceosome... X Y Z catalytic step 2 spliceosome... a, h catalytic step 2 spliceosome... b, i catalytic step 2 spliceosome... d, k catalytic step 2 spliceosome... e, l catalytic step 2 spliceosome... f, m catalytic step 2 spliceosome... g, n catalytic step 2 spliceosome... j, c catalytic step 2 spliceosome... o spliceosomal complex catalytic step 2 spliceosome... p spliceosomal complex U2 snRNP catalytic step 2 spliceosome... t, s, q, r catalytic step 2 spliceosome... u catalytic step 2 spliceosome... v w catalytic step 2 spliceosome... x y
Primary reference	Structure of a human catalytic step I spliceosome., Zhan X, Yan C, Zhang X, Lei J, Shi Y, Science. 2018 Feb 2;359(6375):537-545. doi: 10.1126/science.aar6401. Epub 2018, Jan 4. PMID:29301961

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] () [Save to disk] CSU: Contacts of Structural Units for 5YZG Retrieve 5YZG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YZG from S2C, [Save to disk]

View 5YZG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5YZG

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5yzg_R] [5yzg_T] [5yzg_t] [5yzg_4] [5yzg_M] [5yzg_d] [5yzg_I] [5yzg_p] [5yzg_u] [5yzg_Y] [5yzg_m] [5yzg_v] [5yzg_J] [5yzg_1] [5yzg_C] [5yzg_L] [5yzg_h] [5yzg_i] [5yzg_D] [5yzg_E] [5yzg_F] [5yzg_b] [5yzg_n] [5yzg_N] [5yzg_g] [5yzg_P] [5yzg_K] [5yzg_A] [5yzg_c] [5yzg_a] [5yzg_X] [5yzg_y] [5yzg_q] [5yzg_Q] [5yzg_V] [5yzg_k] [5yzg_2] [5yzg_U] [5yzg_j] [5yzg_3] [5yzg_o] [5yzg_f] [5yzg_W] [5yzg_S] [5yzg_e] [5yzg_B] [5yzg_H] [5yzg_s] [5yzg_x] [5yzg_O] [5yzg_w] [5yzg_r] [5yzg_l] [5yzg_Z] [5yzg_G] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5YZG

Community annotation for 5YZG at PDBWiki (http://pdbwiki.org)

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