6OWL Rna date May 10, 2019
title Rna Oligonucleotides With 3'-Arabino Guanosine Co-Crystalliz Gmp
authors J.W.Szostak, S.Kim, W.Zhang
compound source
Molecule: Rna (5'-R((Lcc)P(Lcc)P(Lcc)P(Lcg) Papcpupupapapgpupcpr)-3');
Chain: A
Engineered: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
Expression_system: Synthetic Construct
Expression_system_taxid: 32630

Molecule: Rna (5'-R(Pg)-3')
Chain: B, C
Engineered: Yes

Organism_scientific: Synthetic Construct
Organism_taxid: 32630
Expression_system: Synthetic Construct
Expression_system_taxid: 32630
symmetry Space Group: H 3 2
R_factor 0.237 R_Free 0.317
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.483 43.483 127.538 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand GAO, LCC, LCG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (12 Kb) [Save to disk]
  • Biological Unit Coordinates (6owl.pdb1.gz) 13 Kb
  • LPC: Ligand-Protein Contacts for 6OWL
  • CSU: Contacts of Structural Units for 6OWL
  • Structure Factors (96 Kb)
  • Retrieve 6OWL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6OWL from S2C, [Save to disk]
  • View 6OWL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6OWL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6owl_C] [6owl_A] [6owl_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6OWL
  • Community annotation for 6OWL at PDBWiki (http://pdbwiki.org)

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