Structure based on 2rde

Ideal structure
Formula: C20 H24 N10 O14 P2
Weight: 690.411
SMILES: "NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH]4CO[P](O)(=O)O[CH]5[CH](O)[CH](O[CH]5CO[P](O)(=O)O[CH]4[CH]3O)n6cnc7C(=O)NC(=Nc67)N"
Spacial conformation based on PDB 2rde.
Also present in other 104 PDB entries.
RESIDUE   C2E     70
CONECT      P1     4 O2P  O1P  O5'  O3A 
CONECT      O2P    2 P1   HO2P
CONECT      O1P    1 P1  
CONECT      O5'    2 P1   C5' 
CONECT      C5'    4 O5'  C4'  H5'1 H5'2
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C3'    4 C4'  O3'  C2'  H3' 
CONECT      O3'    2 C3'  P11 
CONECT      C2'    4 C3'  O2'  C1'  H2' 
CONECT      O2'    2 C2'  HO2'
CONECT      C1'    4 O4'  C2'  N9   H1' 
CONECT      N9     3 C1'  C8   C4  
CONECT      C8     3 N9   N7   H8  
CONECT      N7     2 C8   C5  
CONECT      C5     3 N7   C6   C4  
CONECT      C6     3 C5   O6   N1  
CONECT      O6     1 C6  
CONECT      N1     3 C6   C2   HN1 
CONECT      C2     3 N1   N2   N3  
CONECT      N2     3 C2   HN21 HN22
CONECT      N3     2 C2   C4  
CONECT      C4     3 N9   C5   N3  
CONECT      P11    4 O3'  O21  O11  O5A 
CONECT      O21    2 P11  HO21
CONECT      O11    1 P11 
CONECT      O5A    2 P11  C5A 
CONECT      C5A    4 O5A  C4A  H511 H512
CONECT      C4A    4 C5A  O4A  C3A  H4A 
CONECT      O4A    2 C4A  C1A 
CONECT      C3A    4 C4A  O3A  C2A  H3A 
CONECT      O3A    2 P1   C3A 
CONECT      C2A    4 C3A  O2A  C1A  H2A 
CONECT      O2A    2 C2A  HO2A
CONECT      C1A    4 O4A  C2A  N91  H1A 
CONECT      N91    3 C1A  C81  C41 
CONECT      C81    3 N91  N71  H81 
CONECT      N71    2 C81  C51 
CONECT      C51    3 N71  C61  C41 
CONECT      C61    3 C51  O61  N11 
CONECT      O61    1 C61 
CONECT      N11    3 C61  C21  HN11
CONECT      C21    3 N11  N21  N31 
CONECT      N21    3 C21  HN24 HN23
CONECT      N31    2 C21  C41 
CONECT      C41    3 N91  C51  N31 
CONECT      HO2P   1 O2P 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H3'    1 C3' 
CONECT      H2'    1 C2' 
CONECT      HO2'   1 O2' 
CONECT      H1'    1 C1' 
CONECT      H8     1 C8  
CONECT      HN1    1 N1  
CONECT      HN21   1 N2  
CONECT      HN22   1 N2  
CONECT      HO21   1 O21 
CONECT      H511   1 C5A 
CONECT      H512   1 C5A 
CONECT      H4A    1 C4A 
CONECT      H3A    1 C3A 
CONECT      H2A    1 C2A 
CONECT      HO2A   1 O2A 
CONECT      H1A    1 C1A 
CONECT      H81    1 C81 
CONECT      HN11   1 N11 
CONECT      HN24   1 N21 
CONECT      HN23   1 N21 
HET    C2E             70
HETSYN     C2E c-di-GMP; Cyclic diguanosine monophosphate
HETNAM     C2E 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12
HETNAM   2 C2E -tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:
HETNAM   3 C2E 3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9
HETNAM   4 C2E -diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)
FORMUL      C2E    C20 H24 N10 O14 P2

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science