Structure based on 1tk8

Ideal structure
Name: 2',3'-dideoxy-thymidine-5'-triphosphate
Formula: C10 H17 N2 O13 P3
Weight: 466.169
SMILES: "CC1=CN([CH]2CC[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)O2)C(=O)NC1=O"
Spacial conformation based on PDB 1tk8.
Also present in other 21 PDB entries.
RESIDUE   D3T     45
CONECT      PA     4 O1A  O2A  O5'  O3A 
CONECT      O1A    1 PA  
CONECT      O2A    2 PA   HOA2
CONECT      O5'    2 PA   C5' 
CONECT      C5'    4 O5'  C4'  H5'1 H5'2
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C1'    4 O4'  N1   C2'  H1' 
CONECT      N1     3 C1'  C6   C2  
CONECT      C6     3 N1   C5   H6  
CONECT      C2     3 N1   O2   N3  
CONECT      O2     1 C2  
CONECT      N3     3 C2   C4   HN3 
CONECT      C4     3 N3   O4   C5  
CONECT      O4     1 C4  
CONECT      C5     3 C6   C4   C5M 
CONECT      C5M    4 C5   H5M1 H5M2 H5M3
CONECT      C2'    4 C1'  C3'  H2'1 H2'2
CONECT      C3'    4 C4'  C2'  H3'1 H3'2
CONECT      O3A    2 PA   PB  
CONECT      PB     4 O3A  O1B  O2B  O3B 
CONECT      O1B    1 PB  
CONECT      O2B    2 PB   HOB2
CONECT      O3B    2 PB   PG  
CONECT      PG     4 O3B  O1G  O2G  O3G 
CONECT      O1G    1 PG  
CONECT      O2G    2 PG   HO1 
CONECT      O3G    2 PG   HOG3
CONECT      HOA2   1 O2A 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H1'    1 C1' 
CONECT      H6     1 C6  
CONECT      HN3    1 N3  
CONECT      H5M1   1 C5M 
CONECT      H5M2   1 C5M 
CONECT      H5M3   1 C5M 
CONECT      H2'1   1 C2' 
CONECT      H2'2   1 C2' 
CONECT      H3'1   1 C3' 
CONECT      H3'2   1 C3' 
CONECT      HOB2   1 O2B 
CONECT      HOG3   1 O3G 
CONECT      HO1    1 O2G 
HET    D3T             45
FORMUL      D3T    C10 H17 N2 O13 P3

uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science