PDB Short entry for 2WAL HEADER APOPTOSIS 09-FEB-09 2WAL TITLE CRYSTAL STRUCTURE OF HUMAN GADD45GAMMA COMPND MOL_ID: 1; COMPND 2 MOLECULE: GROWTH ARREST AND DNA-DAMAGE-INDUCIBLE PROTEIN GADD45 COMPND 3 GAMMA; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: GROWTH ARREST AND DNA DAMAGE PROTEIN 45 GAMMA, COMPND 6 CYTOKINE-RESPONSIVE PROTEIN CR6, DNA-DAMAGE-INDUCIBLE TRANSCRIPT COMPND 7 2, DDIT-2; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PQTEV KEYWDS CELL-CYCLE ARREST, DEVELOPMENTAL PROTEIN, GADD, APOPTOSIS, DNA KEYWDS 2 DAMAGE, G2/M PHASE, CDC2/CYCLINB1, DIFFERENTIATION EXPDTA X-RAY DIFFRACTION AUTHOR S.BHATTACHARYA,J.J.MUELLER,Y.ROSKE,A.P.TURNBULL,C.QUEDENAU,F.GOETZ, AUTHOR 2 K.BUESSOW,U.HEINEMANN REVDAT 3 22-APR-15 2WAL 1 HETSYN REVDAT 2 13-JUL-11 2WAL 1 VERSN REVDAT 1 03-MAR-09 2WAL 0 JRNL AUTH S.BHATTACHARYA,J.J.MUELLER,Y.ROSKE,A.P.TURNBULL,C.QUEDENAU, JRNL AUTH 2 F.GOTZ,K.BUSSOW,U.HEINEMANN JRNL TITL THE CRYSTAL STRUCTURE OF HUMAN GADD45GAMMA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 18783 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 988 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.53 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2702 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2700 REMARK 3 BIN FREE R VALUE SET COUNT : 142 REMARK 3 BIN FREE R VALUE : 0.3450 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2142 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 54 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.95000 REMARK 3 B22 (A**2) : 0.95000 REMARK 3 B33 (A**2) : -1.43000 REMARK 3 B12 (A**2) : 0.48000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.247 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.210 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.174 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.972 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2186 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1408 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2970 ; 1.308 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3464 ; 0.906 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 281 ; 6.970 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 98 ;41.823 ;25.918 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 355 ;18.656 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;13.275 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 349 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2465 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 389 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 556 ; 0.233 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1490 ; 0.194 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1101 ; 0.177 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1207 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 80 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.203 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 20 ; 0.255 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.145 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1821 ; 2.236 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2263 ; 2.948 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 856 ; 4.727 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 707 ; 6.219 ; 6.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 104 REMARK 3 ORIGIN FOR THE GROUP (A): -41.4933 -19.1632 14.3657 REMARK 3 T TENSOR REMARK 3 T11: 0.1741 T22: 0.0969 REMARK 3 T33: 0.0562 T12: 0.0928 REMARK 3 T13: 0.0198 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 2.9564 L22: 4.6824 REMARK 3 L33: 2.6980 L12: -0.2353 REMARK 3 L13: 0.0895 L23: -0.4855 REMARK 3 S TENSOR REMARK 3 S11: -0.1208 S12: -0.1704 S13: 0.3007 REMARK 3 S21: 0.0789 S22: -0.0054 S23: -0.3686 REMARK 3 S31: -0.0670 S32: 0.2574 S33: 0.1262 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 105 A 115 REMARK 3 ORIGIN FOR THE GROUP (A): -56.1558 -22.4041 23.0432 REMARK 3 T TENSOR REMARK 3 T11: 0.4772 T22: 0.8933 REMARK 3 T33: 0.9657 T12: 0.3092 REMARK 3 T13: -0.0919 T23: -0.2225 REMARK 3 L TENSOR REMARK 3 L11: 42.0456 L22: 12.8692 REMARK 3 L33: 28.0484 L12: 8.9445 REMARK 3 L13: -23.7968 L23: -17.7071 REMARK 3 S TENSOR REMARK 3 S11: 2.4933 S12: -2.0175 S13: -2.3293 REMARK 3 S21: 1.2176 S22: -3.4367 S23: -0.4446 REMARK 3 S31: -0.9757 S32: -0.5617 S33: 0.9434 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 116 A 131 REMARK 3 ORIGIN FOR THE GROUP (A): -35.0275 -26.5925 21.5331 REMARK 3 T TENSOR REMARK 3 T11: 0.4298 T22: 0.2379 REMARK 3 T33: 0.2735 T12: 0.1942 REMARK 3 T13: -0.0636 T23: 0.1447 REMARK 3 L TENSOR REMARK 3 L11: 11.7813 L22: 10.7501 REMARK 3 L33: 8.8053 L12: -6.0566 REMARK 3 L13: 0.6087 L23: 0.3880 REMARK 3 S TENSOR REMARK 3 S11: -0.2033 S12: -1.5465 S13: -1.5404 REMARK 3 S21: 0.9868 S22: 0.4118 S23: -0.8170 REMARK 3 S31: 1.7434 S32: 0.9161 S33: -0.2085 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 132 A 158 REMARK 3 ORIGIN FOR THE GROUP (A): -36.3617 -24.5315 4.9400 REMARK 3 T TENSOR REMARK 3 T11: 0.2926 T22: 0.2576 REMARK 3 T33: 0.1262 T12: 0.1576 REMARK 3 T13: 0.1825 T23: -0.0501 REMARK 3 L TENSOR REMARK 3 L11: 5.0490 L22: 11.2391 REMARK 3 L33: 6.2258 L12: 1.3193 REMARK 3 L13: 0.1668 L23: -4.8448 REMARK 3 S TENSOR REMARK 3 S11: -0.3196 S12: 0.2476 S13: -0.4285 REMARK 3 S21: -0.3094 S22: 0.0262 S23: -0.7164 REMARK 3 S31: 0.3497 S32: 0.8210 S33: 0.2934 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 11 B 38 REMARK 3 ORIGIN FOR THE GROUP (A): -43.1152 -14.1538 -14.3937 REMARK 3 T TENSOR REMARK 3 T11: 0.5740 T22: 0.7833 REMARK 3 T33: -0.2828 T12: -0.3307 REMARK 3 T13: 0.1921 T23: 0.1105 REMARK 3 L TENSOR REMARK 3 L11: 13.0221 L22: 23.2428 REMARK 3 L33: 11.0888 L12: 0.2164 REMARK 3 L13: 1.1980 L23: -2.0458 REMARK 3 S TENSOR REMARK 3 S11: -0.7117 S12: 2.1557 S13: 0.9897 REMARK 3 S21: -2.8170 S22: 0.6083 S23: -0.6236 REMARK 3 S31: -0.4904 S32: 0.7291 S33: 0.1034 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 39 B 96 REMARK 3 ORIGIN FOR THE GROUP (A): -44.3826 -3.0509 -1.0956 REMARK 3 T TENSOR REMARK 3 T11: 0.4112 T22: 0.1264 REMARK 3 T33: 0.3126 T12: -0.1123 REMARK 3 T13: -0.0335 T23: 0.0979 REMARK 3 L TENSOR REMARK 3 L11: 0.0631 L22: 7.6182 REMARK 3 L33: 4.9194 L12: -0.3763 REMARK 3 L13: -0.4701 L23: 0.0465 REMARK 3 S TENSOR REMARK 3 S11: -0.4627 S12: 0.2359 S13: 0.7631 REMARK 3 S21: -0.5456 S22: 0.3694 S23: -0.0699 REMARK 3 S31: -0.3841 S32: 0.2513 S33: 0.0933 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 97 B 107 REMARK 3 ORIGIN FOR THE GROUP (A): -33.6657 -6.8127 -12.9916 REMARK 3 T TENSOR REMARK 3 T11: 1.0134 T22: 1.4947 REMARK 3 T33: 0.7692 T12: -0.6376 REMARK 3 T13: 0.2742 T23: 0.5076 REMARK 3 L TENSOR REMARK 3 L11: 48.7667 L22: 29.6978 REMARK 3 L33: 30.1698 L12: 37.1169 REMARK 3 L13: 33.9392 L23: 28.9108 REMARK 3 S TENSOR REMARK 3 S11: -1.2040 S12: 1.0292 S13: 1.9954 REMARK 3 S21: -2.0492 S22: -0.8857 S23: -0.1371 REMARK 3 S31: 0.6007 S32: 1.4118 S33: 2.0897 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 117 B 123 REMARK 3 ORIGIN FOR THE GROUP (A): -44.6634 -1.7276 -8.9202 REMARK 3 T TENSOR REMARK 3 T11: 0.6102 T22: 0.2563 REMARK 3 T33: 0.2091 T12: -0.1503 REMARK 3 T13: 0.0645 T23: 0.4487 REMARK 3 L TENSOR REMARK 3 L11: 24.5480 L22: 9.9765 REMARK 3 L33: 13.4671 L12: -0.7207 REMARK 3 L13: 11.7945 L23: 6.4774 REMARK 3 S TENSOR REMARK 3 S11: 0.6742 S12: 2.2980 S13: 1.6155 REMARK 3 S21: -1.3003 S22: -0.4427 S23: 0.3572 REMARK 3 S31: -1.5220 S32: 0.7587 S33: -0.2315 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 130 B 158 REMARK 3 ORIGIN FOR THE GROUP (A): -49.7554 -15.8891 -8.3279 REMARK 3 T TENSOR REMARK 3 T11: 0.4282 T22: 0.2467 REMARK 3 T33: 0.0379 T12: -0.1469 REMARK 3 T13: -0.0158 T23: 0.1459 REMARK 3 L TENSOR REMARK 3 L11: 11.9834 L22: 2.8621 REMARK 3 L33: 8.5295 L12: 2.7658 REMARK 3 L13: 0.5417 L23: -0.0729 REMARK 3 S TENSOR REMARK 3 S11: -0.6326 S12: 1.4893 S13: 0.8071 REMARK 3 S21: -0.8500 S22: 0.5863 S23: 0.1386 REMARK 3 S31: 0.0175 S32: 0.2381 S33: 0.0463 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. N-TERMINAL 10 RESIDUES HAVE NO ELECTRON REMARK 3 DENSITY IN BOTH MOLECULE A AND B. RESIDUES 105-118 AND REMARK 3 RESIDUES 123-132 ARE NOT VISIBLE IN THE ELECTRON DENSITY MAP REMARK 3 OF MOLECULE B AND ARE DISORDERED IN MOLECULE A. REMARK 4 REMARK 4 2WAL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-FEB-09. REMARK 100 THE PDBE ID CODE IS EBI-38614. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.90832 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21647 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.30 REMARK 200 RESOLUTION RANGE LOW (A) : 20.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 7.09 REMARK 200 R MERGE (I) : 0.07 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.70 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 20.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.4 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M MALONATE, 0.1 M BENZONATE, REMARK 280 PH 5.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.91400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 24.45700 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 24.45700 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 48.91400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 10110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 24.45676 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, THR 58 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, THR 58 TO ALA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 LEU A 3 REMARK 465 GLU A 4 REMARK 465 GLU A 5 REMARK 465 VAL A 6 REMARK 465 ARG A 7 REMARK 465 GLY A 8 REMARK 465 GLN A 9 REMARK 465 ASP A 10 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 LEU B 3 REMARK 465 GLU B 4 REMARK 465 GLU B 5 REMARK 465 VAL B 6 REMARK 465 ARG B 7 REMARK 465 GLY B 8 REMARK 465 GLN B 9 REMARK 465 ASP B 10 REMARK 465 GLU B 109 REMARK 465 GLU B 110 REMARK 465 ALA B 111 REMARK 465 GLY B 112 REMARK 465 ALA B 113 REMARK 465 PRO B 114 REMARK 465 GLY B 115 REMARK 465 ASP B 116 REMARK 465 PRO B 125 REMARK 465 ASN B 126 REMARK 465 GLU B 127 REMARK 465 ASP B 128 REMARK 465 ALA B 129 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 14 -0.29 68.11 REMARK 500 VAL A 52 -70.87 -71.75 REMARK 500 GLU A 109 90.68 55.03 REMARK 500 GLU A 110 173.84 69.49 REMARK 500 ALA A 111 99.32 176.98 REMARK 500 ALA A 113 95.25 74.28 REMARK 500 PRO A 114 128.94 -23.79 REMARK 500 ASN A 126 83.25 7.06 REMARK 500 ASP A 128 32.29 71.99 REMARK 500 VAL A 152 75.57 -106.54 REMARK 500 VAL B 12 90.96 53.65 REMARK 500 GLN B 34 -25.60 78.82 REMARK 500 ARG B 35 54.86 -101.04 REMARK 500 GLN B 36 169.07 163.24 REMARK 500 CYS B 38 -154.99 30.77 REMARK 500 ALA B 107 45.46 72.20 REMARK 500 SER B 123 -155.38 -119.86 REMARK 500 LYS B 131 -77.29 -117.21 REMARK 500 ASP B 132 109.76 49.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 127 ASP A 128 -145.60 REMARK 500 GLN B 34 ARG B 35 148.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA A1160 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA A1161 DBREF 2WAL A 1 159 UNP O95257 GA45G_HUMAN 1 159 DBREF 2WAL B 1 159 UNP O95257 GA45G_HUMAN 1 159 SEQADV 2WAL ALA A 58 UNP O95257 THR 58 ENGINEERED MUTATION SEQADV 2WAL ALA B 58 UNP O95257 THR 58 ENGINEERED MUTATION SEQRES 1 A 159 MET THR LEU GLU GLU VAL ARG GLY GLN ASP THR VAL PRO SEQRES 2 A 159 GLU SER THR ALA ARG MET GLN GLY ALA GLY LYS ALA LEU SEQRES 3 A 159 HIS GLU LEU LEU LEU SER ALA GLN ARG GLN GLY CYS LEU SEQRES 4 A 159 THR ALA GLY VAL TYR GLU SER ALA LYS VAL LEU ASN VAL SEQRES 5 A 159 ASP PRO ASP ASN VAL ALA PHE CYS VAL LEU ALA ALA GLY SEQRES 6 A 159 GLU GLU ASP GLU GLY ASP ILE ALA LEU GLN ILE HIS PHE SEQRES 7 A 159 THR LEU ILE GLN ALA PHE CYS CYS GLU ASN ASP ILE ASP SEQRES 8 A 159 ILE VAL ARG VAL GLY ASP VAL GLN ARG LEU ALA ALA ILE SEQRES 9 A 159 VAL GLY ALA GLY GLU GLU ALA GLY ALA PRO GLY ASP LEU SEQRES 10 A 159 HIS CYS ILE LEU ILE SER ASN PRO ASN GLU ASP ALA TRP SEQRES 11 A 159 LYS ASP PRO ALA LEU GLU LYS LEU SER LEU PHE CYS GLU SEQRES 12 A 159 GLU SER ARG SER VAL ASN ASP TRP VAL PRO SER ILE THR SEQRES 13 A 159 LEU PRO GLU SEQRES 1 B 159 MET THR LEU GLU GLU VAL ARG GLY GLN ASP THR VAL PRO SEQRES 2 B 159 GLU SER THR ALA ARG MET GLN GLY ALA GLY LYS ALA LEU SEQRES 3 B 159 HIS GLU LEU LEU LEU SER ALA GLN ARG GLN GLY CYS LEU SEQRES 4 B 159 THR ALA GLY VAL TYR GLU SER ALA LYS VAL LEU ASN VAL SEQRES 5 B 159 ASP PRO ASP ASN VAL ALA PHE CYS VAL LEU ALA ALA GLY SEQRES 6 B 159 GLU GLU ASP GLU GLY ASP ILE ALA LEU GLN ILE HIS PHE SEQRES 7 B 159 THR LEU ILE GLN ALA PHE CYS CYS GLU ASN ASP ILE ASP SEQRES 8 B 159 ILE VAL ARG VAL GLY ASP VAL GLN ARG LEU ALA ALA ILE SEQRES 9 B 159 VAL GLY ALA GLY GLU GLU ALA GLY ALA PRO GLY ASP LEU SEQRES 10 B 159 HIS CYS ILE LEU ILE SER ASN PRO ASN GLU ASP ALA TRP SEQRES 11 B 159 LYS ASP PRO ALA LEU GLU LYS LEU SER LEU PHE CYS GLU SEQRES 12 B 159 GLU SER ARG SER VAL ASN ASP TRP VAL PRO SER ILE THR SEQRES 13 B 159 LEU PRO GLU HET MLA A1160 7 HET MLA A1161 7 HETNAM MLA MALONIC ACID HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID FORMUL 3 MLA 2(C3 H4 O4) FORMUL 4 HOH *54(H2 O) HELIX 1 1 THR A 16 GLN A 36 1 21 HELIX 2 2 GLY A 42 ASP A 53 1 12 HELIX 3 3 GLU A 66 GLY A 70 5 5 HELIX 4 4 ASP A 71 ASN A 88 1 18 HELIX 5 5 ASP A 97 VAL A 105 1 9 HELIX 6 6 ASP A 132 SER A 147 1 16 HELIX 7 7 THR B 16 ALA B 33 1 18 HELIX 8 8 GLY B 42 ASP B 53 1 12 HELIX 9 9 GLY B 65 GLY B 70 5 6 HELIX 10 10 ASP B 71 ASN B 88 1 18 HELIX 11 11 ASP B 97 VAL B 105 1 9 HELIX 12 12 ASP B 132 VAL B 148 1 17 SHEET 1 AA 4 LEU A 39 ALA A 41 0 SHEET 2 AA 4 CYS A 119 SER A 123 -1 O LEU A 121 N THR A 40 SHEET 3 AA 4 VAL A 57 ALA A 63 -1 N ALA A 58 O ILE A 122 SHEET 4 AA 4 ASP A 91 VAL A 95 1 O ASP A 91 N CYS A 60 SHEET 1 BA 5 THR B 40 ALA B 41 0 SHEET 2 BA 5 CYS B 119 ILE B 122 -1 O LEU B 121 N THR B 40 SHEET 3 BA 5 PHE B 59 ALA B 63 -1 O PHE B 59 N ILE B 122 SHEET 4 BA 5 ASP B 91 VAL B 95 1 O ASP B 91 N CYS B 60 SHEET 5 BA 5 SER B 154 ILE B 155 1 N ILE B 155 O ARG B 94 SITE 1 AC1 6 LEU A 26 VAL A 95 ASP A 97 LEU A 101 SITE 2 AC1 6 THR A 156 LEU A 157 SITE 1 AC2 6 TYR A 44 HIS A 77 ALA B 47 LEU B 50 SITE 2 AC2 6 HIS B 77 LEU B 80 CRYST1 108.717 108.717 73.371 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009198 0.005311 0.000000 0.00000 SCALE2 0.000000 0.010621 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013629 0.00000