PDB Short entry for 3KJO
HEADER    DNA BINDING PROTEIN/DNA                 03-NOV-09   3KJO              
TITLE     CRYSTAL STRUCTURE OF HPOT1V2-DTRUD(AGGGTTAG)                          
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PROTECTION OF TELOMERES PROTEIN 1;                         
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: UNP RESIDUES 1-299;                                        
COMPND   5 SYNONYM: HPOT1, POT1-LIKE TELOMERE END-BINDING PROTEIN;              
COMPND   6 ENGINEERED: YES;                                                     
COMPND   7 OTHER_DETAILS: PUTATIVE SPLICE VARIANT OF HPOT1;                     
COMPND   8 MOL_ID: 2;                                                           
COMPND   9 MOLECULE: DNA/RNA (5'-D(*T)-R(P*U)-D(P*AP*GP*GP*GP*TP*TP*AP*G)-3');  
COMPND  10 CHAIN: B;                                                            
COMPND  11 ENGINEERED: YES;                                                     
COMPND  12 OTHER_DETAILS: SINGLE-STRANDED DNA CONTAINING AN RU RIBONUCLEOTIDE   
COMPND  13 SUBSTITUTION AT POSITION 4.                                          
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: POT1;                                                          
SOURCE   6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;                            
SOURCE   7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM;                             
SOURCE   8 EXPRESSION_SYSTEM_TAXID: 7108;                                       
SOURCE   9 EXPRESSION_SYSTEM_STRAIN: SF9;                                       
SOURCE  10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACMID;                               
SOURCE  11 EXPRESSION_SYSTEM_PLASMID: PFASTBAC;                                 
SOURCE  12 MOL_ID: 2;                                                           
SOURCE  13 SYNTHETIC: YES;                                                      
SOURCE  14 OTHER_DETAILS: 10MER SYNTHETIC OLIGONUCLEOTIDE CONTAINING HUMAN      
SOURCE  15 TELOMERIC REPEAT SEQUENCE WITH A SINGLE RIBONUCLEOTIDE AT POSITION 4 
KEYWDS    OB DOMAIN, PROTEIN-DNA COMPLEX, PROTEIN-RNA COMPLEX, ALTERNATIVE      
KEYWDS   2 SPLICING, CHROMOSOMAL PROTEIN, DNA-BINDING, NUCLEUS, POLYMORPHISM,   
KEYWDS   3 TELOMERE, DNA BINDING PROTEIN-DNA COMPLEX                            
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    J.NANDAKUMAR,T.R.CECH,E.R.PODELL                                      
REVDAT   3   01-NOV-17 3KJO    1       REMARK                                   
REVDAT   2   02-FEB-10 3KJO    1       JRNL                                     
REVDAT   1   19-JAN-10 3KJO    0                                                
JRNL        AUTH   J.NANDAKUMAR,E.R.PODELL,T.R.CECH                             
JRNL        TITL   HOW TELOMERIC PROTEIN POT1 AVOIDS RNA TO ACHIEVE SPECIFICITY 
JRNL        TITL 2 FOR SINGLE-STRANDED DNA.                                     
JRNL        REF    PROC.NATL.ACAD.SCI.USA        V. 107   651 2010              
JRNL        REFN                   ISSN 0027-8424                               
JRNL        PMID   20080730                                                     
JRNL        DOI    10.1073/PNAS.0911099107                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.80 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 1.2                                              
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : ENGH & HUBER                                    
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 32.70                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : 208708.000                     
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : 0.0000                         
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 96.0                           
REMARK   3   NUMBER OF REFLECTIONS             : 34134                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM SET THAT WAS USED FOR    
REMARK   3                                      STRUCTURAL SOLUTION OF 1XJV     
REMARK   3   R VALUE            (WORKING SET) : 0.228                           
REMARK   3   FREE R VALUE                     : 0.238                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1716                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : 0.006                           
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 6                            
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.80                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 1.91                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 87.30                        
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : 4843                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.3200                       
REMARK   3   BIN FREE R VALUE                    : 0.3140                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : 5.30                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 269                          
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : 0.019                        
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2309                                    
REMARK   3   NUCLEIC ACID ATOMS       : 207                                     
REMARK   3   HETEROGEN ATOMS          : 0                                       
REMARK   3   SOLVENT ATOMS            : 223                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 28.70                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 34.79                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 5.37000                                              
REMARK   3    B22 (A**2) : 1.18000                                              
REMARK   3    B33 (A**2) : -6.56000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.24                            
REMARK   3   ESD FROM SIGMAA              (A) : 0.20                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : 5.00                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : 0.27                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : 0.21                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.005                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.200                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 25.20                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : 0.840                           
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : RESTRAINED                                
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : 1.390 ; 1.500                
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : 2.190 ; 2.000                
REMARK   3   SIDE-CHAIN BOND              (A**2) : 2.000 ; 2.000                
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : 3.020 ; 2.500                
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : FLAT MODEL                                           
REMARK   3   KSOL        : 0.40                                                 
REMARK   3   BSOL        : 53.75                                                
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : PROTEIN_REP.PARAM                              
REMARK   3  PARAMETER FILE  2  : DNA-RNA_REP.PARAM                              
REMARK   3  PARAMETER FILE  3  : WATER_REP.PARAM                                
REMARK   3  PARAMETER FILE  4  : ION.PARAM                                      
REMARK   3  PARAMETER FILE  5  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : PROTEIN.TOP                                    
REMARK   3  TOPOLOGY FILE  2   : DNA-RNA.TOP                                    
REMARK   3  TOPOLOGY FILE  3   : WATER.TOP                                      
REMARK   3  TOPOLOGY FILE  4   : ION.TOP                                        
REMARK   3  TOPOLOGY FILE  5   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED                   
REMARK   4                                                                      
REMARK   4 3KJO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-NOV-09.                  
REMARK 100 THE DEPOSITION ID IS D_1000056075.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 31-JUL-09                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 5.6                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : ALS                                
REMARK 200  BEAMLINE                       : 8.2.1                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0000                             
REMARK 200  MONOCHROMATOR                  : KOHZU                              
REMARK 200  OPTICS                         : KOHZU: DOUBLE CRYSTAL SI(111)      
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315R                  
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000                    
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK, HKL-2000                
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 35300                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.800                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -3.000                             
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.5                               
REMARK 200  DATA REDUNDANCY                : 6.900                              
REMARK 200  R MERGE                    (I) : 0.04500                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 22.2000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.86                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 97.8                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 6.10                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.33200                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 3.900                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: REFMAC                                                
REMARK 200 STARTING MODEL: PDB ENTRY 1XJV                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 52.11                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, TRISODIUM CITRATE ,    
REMARK 280  PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K             
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z+1/2                                             
REMARK 290       3555   -X,Y,-Z+1/2                                             
REMARK 290       4555   X,-Y,-Z                                                 
REMARK 290       5555   X+1/2,Y+1/2,Z                                           
REMARK 290       6555   -X+1/2,-Y+1/2,Z+1/2                                     
REMARK 290       7555   -X+1/2,Y+1/2,-Z+1/2                                     
REMARK 290       8555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       35.86800            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       35.86800            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   5  1.000000  0.000000  0.000000       50.93350            
REMARK 290   SMTRY2   5  0.000000  1.000000  0.000000       51.79550            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   6 -1.000000  0.000000  0.000000       50.93350            
REMARK 290   SMTRY2   6  0.000000 -1.000000  0.000000       51.79550            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       35.86800            
REMARK 290   SMTRY1   7 -1.000000  0.000000  0.000000       50.93350            
REMARK 290   SMTRY2   7  0.000000  1.000000  0.000000       51.79550            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000       35.86800            
REMARK 290   SMTRY1   8  1.000000  0.000000  0.000000       50.93350            
REMARK 290   SMTRY2   8  0.000000 -1.000000  0.000000       51.79550            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 2160 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 15110 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A 320  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH A 398  LIES ON A SPECIAL POSITION.                          
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     SER A     2                                                      
REMARK 465     LEU A     3                                                      
REMARK 465     VAL A     4                                                      
REMARK 465     PRO A     5                                                      
REMARK 465     TRP A   148                                                      
REMARK 465     ASP A   200                                                      
REMARK 465     LEU A   201                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   O    HOH B   151     O    HOH B   151     3655     1.38            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500      U B   4   N1  -  C1' -  C2' ANGL. DEV. =   8.1 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    LYS A  91      -11.82     66.71                                   
REMARK 500    PRO A 146      178.19    -50.28                                   
REMARK 500    VAL A 174      -75.13   -125.54                                   
REMARK 500    ASP A 175       29.03   -147.39                                   
REMARK 500    GLN A 214     -128.94     50.50                                   
REMARK 500    ASP A 224     -117.97     48.54                                   
REMARK 500    TYR A 271       19.09     56.92                                   
REMARK 500    THR A 298       76.92   -118.74                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1XJV   RELATED DB: PDB                                   
REMARK 900 SAME PROTEIN COMPLEXED WITH ALL-DNA 10MER OLIGONUCLEOTIDE            
REMARK 900 RELATED ID: 3KJP   RELATED DB: PDB                                   
REMARK 900 SAME PROTEIN COMPLEXED WITH ALL-DNA 12MER OLIGOMUCLEOTIDE            
DBREF  3KJO A    1   299  UNP    Q9NUX5   POTE1_HUMAN      1    299             
DBREF  3KJO B    3    12  PDB    3KJO     3KJO             3     12             
SEQRES   1 A  299  MET SER LEU VAL PRO ALA THR ASN TYR ILE TYR THR PRO          
SEQRES   2 A  299  LEU ASN GLN LEU LYS GLY GLY THR ILE VAL ASN VAL TYR          
SEQRES   3 A  299  GLY VAL VAL LYS PHE PHE LYS PRO PRO TYR LEU SER LYS          
SEQRES   4 A  299  GLY THR ASP TYR CYS SER VAL VAL THR ILE VAL ASP GLN          
SEQRES   5 A  299  THR ASN VAL LYS LEU THR CYS LEU LEU PHE SER GLY ASN          
SEQRES   6 A  299  TYR GLU ALA LEU PRO ILE ILE TYR LYS ASN GLY ASP ILE          
SEQRES   7 A  299  VAL ARG PHE HIS ARG LEU LYS ILE GLN VAL TYR LYS LYS          
SEQRES   8 A  299  GLU THR GLN GLY ILE THR SER SER GLY PHE ALA SER LEU          
SEQRES   9 A  299  THR PHE GLU GLY THR LEU GLY ALA PRO ILE ILE PRO ARG          
SEQRES  10 A  299  THR SER SER LYS TYR PHE ASN PHE THR THR GLU ASP HIS          
SEQRES  11 A  299  LYS MET VAL GLU ALA LEU ARG VAL TRP ALA SER THR HIS          
SEQRES  12 A  299  MET SER PRO SER TRP THR LEU LEU LYS LEU CYS ASP VAL          
SEQRES  13 A  299  GLN PRO MET GLN TYR PHE ASP LEU THR CYS GLN LEU LEU          
SEQRES  14 A  299  GLY LYS ALA GLU VAL ASP GLY ALA SER PHE LEU LEU LYS          
SEQRES  15 A  299  VAL TRP ASP GLY THR ARG THR PRO PHE PRO SER TRP ARG          
SEQRES  16 A  299  VAL LEU ILE GLN ASP LEU VAL LEU GLU GLY ASP LEU SER          
SEQRES  17 A  299  HIS ILE HIS ARG LEU GLN ASN LEU THR ILE ASP ILE LEU          
SEQRES  18 A  299  VAL TYR ASP ASN HIS VAL HIS VAL ALA ARG SER LEU LYS          
SEQRES  19 A  299  VAL GLY SER PHE LEU ARG ILE TYR SER LEU HIS THR LYS          
SEQRES  20 A  299  LEU GLN SER MET ASN SER GLU ASN GLN THR MET LEU SER          
SEQRES  21 A  299  LEU GLU PHE HIS LEU HIS GLY GLY THR SER TYR GLY ARG          
SEQRES  22 A  299  GLY ILE ARG VAL LEU PRO GLU SER ASN SER ASP VAL ASP          
SEQRES  23 A  299  GLN LEU LYS LYS ASP LEU GLU SER ALA ASN LEU THR ALA          
SEQRES   1 B   10   DT   U  DA  DG  DG  DG  DT  DT  DA  DG                      
FORMUL   3  HOH   *223(H2 O)                                                    
HELIX    1   1 ASN A   65  LEU A   69  5                                   5    
HELIX    2   2 THR A  126  MET A  144  1                                  19    
HELIX    3   3 LYS A  152  VAL A  156  5                                   5    
HELIX    4   4 ASP A  206  GLN A  214  1                                   9    
HELIX    5   5 ASN A  215  THR A  217  5                                   3    
HELIX    6   6 ASN A  225  LEU A  233  1                                   9    
HELIX    7   7 THR A  269  ARG A  273  5                                   5    
HELIX    8   8 ASN A  282  THR A  298  1                                  17    
SHEET    1   A 6 THR A  21  LEU A  37  0                                        
SHEET    2   A 6 TYR A  43  VAL A  50 -1  O  CYS A  44   N  TYR A  36           
SHEET    3   A 6 LYS A  56  SER A  63 -1  O  SER A  63   N  TYR A  43           
SHEET    4   A 6 GLU A  92  PHE A 106  1  O  GLY A  95   N  LEU A  60           
SHEET    5   A 6 ILE A  78  TYR A  89 -1  N  TYR A  89   O  GLU A  92           
SHEET    6   A 6 THR A  21  LEU A  37 -1  N  THR A  21   O  ILE A  86           
SHEET    1   B 7 GLU A 204  GLY A 205  0                                        
SHEET    2   B 7 TYR A 161  GLU A 173 -1  N  LYS A 171   O  GLU A 204           
SHEET    3   B 7 SER A 178  TRP A 184 -1  O  LEU A 180   N  ALA A 172           
SHEET    4   B 7 ILE A 218  TYR A 223 -1  O  ILE A 220   N  LEU A 181           
SHEET    5   B 7 THR A 257  LEU A 265  1  O  LEU A 265   N  LEU A 221           
SHEET    6   B 7 PHE A 238  MET A 251 -1  N  GLN A 249   O  SER A 260           
SHEET    7   B 7 GLY A 274  LEU A 278 -1  O  LEU A 278   N  PHE A 238           
SHEET    1   C 4 GLU A 204  GLY A 205  0                                        
SHEET    2   C 4 TYR A 161  GLU A 173 -1  N  LYS A 171   O  GLU A 204           
SHEET    3   C 4 PHE A 238  MET A 251 -1  O  LEU A 244   N  PHE A 162           
SHEET    4   C 4 GLY A 274  LEU A 278 -1  O  LEU A 278   N  PHE A 238           
CRYST1  101.867  103.591   71.736  90.00  90.00  90.00 C 2 2 21      8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.009817  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.009653  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.013940        0.00000