PDB Short entry for 4E9F
HEADER    HYDROLASE/DNA                           21-MAR-12   4E9F              
TITLE     STRUCTURE OF THE GLYCOSYLASE DOMAIN OF MBD4 BOUND TO AP SITE          
TITLE    2 CONTAINING DNA                                                       
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: METHYL-CPG-BINDING DOMAIN PROTEIN 4;                       
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: GLYCOSYLASE DOMAIN OF MBD4 (RESIDUES 426-580);             
COMPND   5 SYNONYM: METHYL-CPG-BINDING ENDONUCLEASE 1, METHYL-CPG-BINDING       
COMPND   6 PROTEIN MBD4, MISMATCH-SPECIFIC DNA N-GLYCOSYLASE;                   
COMPND   7 EC: 3.2.2.-;                                                         
COMPND   8 ENGINEERED: YES;                                                     
COMPND   9 MOL_ID: 2;                                                           
COMPND  10 MOLECULE: DNA (5'-D(*CP*CP*AP*GP*CP*GP*(3DR)P*GP*CP*AP*GP*C)-3');    
COMPND  11 CHAIN: C;                                                            
COMPND  12 ENGINEERED: YES;                                                     
COMPND  13 OTHER_DETAILS: DNA FRAGMENT WITH 3DR SITE;                           
COMPND  14 MOL_ID: 3;                                                           
COMPND  15 MOLECULE: DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3');        
COMPND  16 CHAIN: D;                                                            
COMPND  17 ENGINEERED: YES;                                                     
COMPND  18 OTHER_DETAILS: DNA FRAGMENT                                          
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: MBD4, MED1;                                                    
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 MOL_ID: 2;                                                           
SOURCE   9 SYNTHETIC: YES;                                                      
SOURCE  10 OTHER_DETAILS: SYNTHETIC DNA;                                        
SOURCE  11 MOL_ID: 3;                                                           
SOURCE  12 SYNTHETIC: YES;                                                      
SOURCE  13 OTHER_DETAILS: SYNTHETIC DNA                                         
KEYWDS    HHH DNA GLYCOSYLASE FAMILY, HYDROLASE-DNA COMPLEX                     
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    S.MORERA,A.VIGOUROUX                                                  
REVDAT   3   28-DEC-16 4E9F    1       TITLE                                    
REVDAT   2   07-NOV-12 4E9F    1       JRNL                                     
REVDAT   1   08-AUG-12 4E9F    0                                                
JRNL        AUTH   S.MORERA,I.GRIN,A.VIGOUROUX,S.COUVE,V.HENRIOT,M.SAPARBAEV,   
JRNL        AUTH 2 A.A.ISHCHENKO                                                
JRNL        TITL   BIOCHEMICAL AND STRUCTURAL CHARACTERIZATION OF THE           
JRNL        TITL 2 GLYCOSYLASE DOMAIN OF MBD4 BOUND TO THYMINE AND              
JRNL        TITL 3 5-HYDROXYMETHYURACIL-CONTAINING DNA.                         
JRNL        REF    NUCLEIC ACIDS RES.            V.  40  9917 2012              
JRNL        REFN                   ISSN 0305-1048                               
JRNL        PMID   22848106                                                     
JRNL        DOI    10.1093/NAR/GKS714                                           
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.79 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : BUSTER 2.10.0                                        
REMARK   3   AUTHORS     : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,              
REMARK   3               : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,              
REMARK   3               : WOMACK,MATTHEWS,TEN EYCK,TRONRUD                     
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 37.80                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.3                           
REMARK   3   NUMBER OF REFLECTIONS             : 21487                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD           : THROUGHOUT                     
REMARK   3   FREE R VALUE TEST SET SELECTION   : RANDOM                         
REMARK   3   R VALUE     (WORKING + TEST SET)  : 0.216                          
REMARK   3   R VALUE            (WORKING SET)  : 0.214                          
REMARK   3   FREE R VALUE                      : 0.248                          
REMARK   3   FREE R VALUE TEST SET SIZE   (%)  : 5.120                          
REMARK   3   FREE R VALUE TEST SET COUNT       : 1101                           
REMARK   3   ESTIMATED ERROR OF FREE R VALUE   : NULL                           
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED               : 11                       
REMARK   3   BIN RESOLUTION RANGE HIGH   (ANGSTROMS) : 1.79                     
REMARK   3   BIN RESOLUTION RANGE LOW    (ANGSTROMS) : 1.88                     
REMARK   3   BIN COMPLETENESS (WORKING+TEST)     (%) : 99.27                    
REMARK   3   REFLECTIONS IN BIN (WORKING + TEST SET) : 2704                     
REMARK   3   BIN R VALUE        (WORKING + TEST SET) : 0.2319                   
REMARK   3   REFLECTIONS IN BIN        (WORKING SET) : 2564                     
REMARK   3   BIN R VALUE               (WORKING SET) : 0.2340                   
REMARK   3   BIN FREE R VALUE                        : 0.1973                   
REMARK   3   BIN FREE R VALUE TEST SET SIZE      (%) : 5.18                     
REMARK   3   BIN FREE R VALUE TEST SET COUNT         : 140                      
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE     : NULL                     
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 1179                                    
REMARK   3   NUCLEIC ACID ATOMS       : 478                                     
REMARK   3   HETEROGEN ATOMS          : 4                                       
REMARK   3   SOLVENT ATOMS            : 86                                      
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT                    (A) : 0.238               
REMARK   3   DPI (BLOW EQ-10) BASED ON R VALUE        (A) : NULL                
REMARK   3   DPI (BLOW EQ-9) BASED ON FREE R VALUE    (A) : NULL                
REMARK   3   DPI (CRUICKSHANK) BASED ON R VALUE       (A) : 0.132               
REMARK   3   DPI (CRUICKSHANK) BASED ON FREE R VALUE  (A) : NULL                
REMARK   3                                                                      
REMARK   3   REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797                
REMARK   3               CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601     
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.943                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.929                         
REMARK   3                                                                      
REMARK   3   NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15                    
REMARK   3   TERM                          COUNT    WEIGHT   FUNCTION.          
REMARK   3    BOND LENGTHS              : 1760   ; 2.000  ; HARMONIC            
REMARK   3    BOND ANGLES               : 2479   ; 2.000  ; HARMONIC            
REMARK   3    TORSION ANGLES            : 678    ; 2.000  ; SINUSOIDAL          
REMARK   3    TRIGONAL CARBON PLANES    : 26     ; 2.000  ; HARMONIC            
REMARK   3    GENERAL PLANES            : 193    ; 5.000  ; HARMONIC            
REMARK   3    ISOTROPIC THERMAL FACTORS : 1760   ; 20.000 ; HARMONIC            
REMARK   3    BAD NON-BONDED CONTACTS   : NULL   ; NULL   ; NULL                
REMARK   3    IMPROPER TORSIONS         : NULL   ; NULL   ; NULL                
REMARK   3    PSEUDOROTATION ANGLES     : NULL   ; NULL   ; NULL                
REMARK   3    CHIRAL IMPROPER TORSION   : 216    ; 5.000  ; SEMIHARMONIC        
REMARK   3    SUM OF OCCUPANCIES        : NULL   ; NULL   ; NULL                
REMARK   3    UTILITY DISTANCES         : NULL   ; NULL   ; NULL                
REMARK   3    UTILITY ANGLES            : NULL   ; NULL   ; NULL                
REMARK   3    UTILITY TORSION           : NULL   ; NULL   ; NULL                
REMARK   3    IDEAL-DIST CONTACT TERM   : 1915   ; 4.000  ; SEMIHARMONIC        
REMARK   3                                                                      
REMARK   3   RMS DEVIATIONS FROM IDEAL VALUES.                                  
REMARK   3    BOND LENGTHS                       (A) : 0.010                    
REMARK   3    BOND ANGLES                  (DEGREES) : 1.07                     
REMARK   3    PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.21                     
REMARK   3    OTHER TORSION ANGLES         (DEGREES) : 18.29                    
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 4E9F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-MAR-12.                  
REMARK 100 THE RCSB ID CODE IS RCSB071335.                                      
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 29-AUG-11                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 8                                  
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : ESRF                               
REMARK 200  BEAMLINE                       : ID29                               
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9                                
REMARK 200  MONOCHROMATOR                  : SI 111 CHANNEL                     
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : PSI PILATUS 6M                     
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : XDS                                
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 21525                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.790                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 38.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 2.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.6                               
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : 0.06300                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 13.3000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.90                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 98.5                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: PDB ENTRY 4ENE                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 40.88                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 25% ETHYLENE GLYCOL, PH 8, VAPOR         
REMARK 280  DIFFUSION, HANGING DROP, TEMPERATURE 298K                           
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       20.53500            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       48.32500            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       27.92000            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       48.32500            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       20.53500            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       27.92000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 3820 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 10240 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A   426                                                      
REMARK 465     LEU A   427                                                      
REMARK 465     SER A   428                                                      
REMARK 465     PRO A   429                                                      
REMARK 465     PRO A   430                                                      
REMARK 465     ARG A   431                                                      
REMARK 465     ARG A   432                                                      
REMARK 465     LYS A   433                                                      
REMARK 465     ALA A   434                                                      
REMARK 465     PHE A   435                                                      
REMARK 465     LYS A   436                                                      
REMARK 465     GLU A   575                                                      
REMARK 465     LYS A   576                                                      
REMARK 465     LEU A   577                                                      
REMARK 465     SER A   578                                                      
REMARK 465     LEU A   579                                                      
REMARK 465     SER A   580                                                      
REMARK 465     HIS A   581                                                      
REMARK 465     HIS A   582                                                      
REMARK 465     HIS A   583                                                      
REMARK 465     HIS A   584                                                      
REMARK 465     HIS A   585                                                      
REMARK 465     HIS A   586                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DC C   1   O4' -  C1' -  N1  ANGL. DEV. =   4.6 DEGREES          
REMARK 500     DC C   1   N1  -  C2  -  O2  ANGL. DEV. =   4.9 DEGREES          
REMARK 500     DC C   1   N3  -  C2  -  O2  ANGL. DEV. =  -4.4 DEGREES          
REMARK 500     DC C   1   C2  -  N1  -  C1' ANGL. DEV. =   7.5 DEGREES          
REMARK 500     DC C   5   O4' -  C1' -  N1  ANGL. DEV. =   2.7 DEGREES          
REMARK 500     DG C   4   C3' -  O3' -  P   ANGL. DEV. =   7.8 DEGREES          
REMARK 500     DG C  11   O4' -  C1' -  N9  ANGL. DEV. =   2.5 DEGREES          
REMARK 500     DC C  12   O4' -  C1' -  N1  ANGL. DEV. =   2.0 DEGREES          
REMARK 500     DG C  11   C3' -  O3' -  P   ANGL. DEV. =   9.4 DEGREES          
REMARK 500     DG D   1   C3' -  O3' -  P   ANGL. DEV. =  11.6 DEGREES          
REMARK 500     DC D   2   C3' -  O3' -  P   ANGL. DEV. =   9.9 DEGREES          
REMARK 500     DC D   5   O4' -  C1' -  N1  ANGL. DEV. =   3.6 DEGREES          
REMARK 500     DT D  10   O4' -  C1' -  N1  ANGL. DEV. =   2.4 DEGREES          
REMARK 500     DG D  12   O4' -  C1' -  N9  ANGL. DEV. =   3.0 DEGREES          
REMARK 500     DG D  11   C3' -  O3' -  P   ANGL. DEV. =   8.1 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH D 108        DISTANCE =  6.38 ANGSTROMS                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 101                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 4E9E   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4E9G   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4E9H   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4EA4   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4EAB   RELATED DB: PDB                                   
DBREF  4E9F A  427   580  UNP    O95243   MBD4_HUMAN     427    580             
DBREF  4E9F C    1    12  PDB    4E9F     4E9F             1     12             
DBREF  4E9F D    1    12  PDB    4E9F     4E9F             1     12             
SEQADV 4E9F MET A  426  UNP  O95243              EXPRESSION TAG                 
SEQADV 4E9F HIS A  581  UNP  O95243              EXPRESSION TAG                 
SEQADV 4E9F HIS A  582  UNP  O95243              EXPRESSION TAG                 
SEQADV 4E9F HIS A  583  UNP  O95243              EXPRESSION TAG                 
SEQADV 4E9F HIS A  584  UNP  O95243              EXPRESSION TAG                 
SEQADV 4E9F HIS A  585  UNP  O95243              EXPRESSION TAG                 
SEQADV 4E9F HIS A  586  UNP  O95243              EXPRESSION TAG                 
SEQRES   1 A  161  MET LEU SER PRO PRO ARG ARG LYS ALA PHE LYS LYS TRP          
SEQRES   2 A  161  THR PRO PRO ARG SER PRO PHE ASN LEU VAL GLN GLU THR          
SEQRES   3 A  161  LEU PHE HIS ASP PRO TRP LYS LEU LEU ILE ALA THR ILE          
SEQRES   4 A  161  PHE LEU ASN ARG THR SER GLY LYS MET ALA ILE PRO VAL          
SEQRES   5 A  161  LEU TRP LYS PHE LEU GLU LYS TYR PRO SER ALA GLU VAL          
SEQRES   6 A  161  ALA ARG THR ALA ASP TRP ARG ASP VAL SER GLU LEU LEU          
SEQRES   7 A  161  LYS PRO LEU GLY LEU TYR ASP LEU ARG ALA LYS THR ILE          
SEQRES   8 A  161  VAL LYS PHE SER ASP GLU TYR LEU THR LYS GLN TRP LYS          
SEQRES   9 A  161  TYR PRO ILE GLU LEU HIS GLY ILE GLY LYS TYR GLY ASN          
SEQRES  10 A  161  ASP SER TYR ARG ILE PHE CYS VAL ASN GLU TRP LYS GLN          
SEQRES  11 A  161  VAL HIS PRO GLU ASP HIS LYS LEU ASN LYS TYR HIS ASP          
SEQRES  12 A  161  TRP LEU TRP GLU ASN HIS GLU LYS LEU SER LEU SER HIS          
SEQRES  13 A  161  HIS HIS HIS HIS HIS                                          
SEQRES   1 C   12   DC  DC  DA  DG  DC  DG 3DR  DG  DC  DA  DG  DC              
SEQRES   1 D   12   DG  DC  DT  DG  DC  DG  DC  DG  DC  DT  DG  DG              
HET    3DR  C   7      11                                                       
HET    EDO  C 101       4                                                       
HETNAM     3DR 1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE                           
HETNAM     EDO 1,2-ETHANEDIOL                                                   
HETSYN     3DR ABASIC DIDEOXYRIBOSE                                             
HETSYN     EDO ETHYLENE GLYCOL                                                  
FORMUL   2  3DR    C5 H11 O6 P                                                  
FORMUL   4  EDO    C2 H6 O2                                                     
FORMUL   5  HOH   *86(H2 O)                                                     
HELIX    1   1 VAL A  448  PHE A  453  1                                   6    
HELIX    2   2 ASP A  455  LEU A  466  1                                  12    
HELIX    3   3 SER A  470  TYR A  485  1                                  16    
HELIX    4   4 SER A  487  ARG A  492  1                                   6    
HELIX    5   5 ASP A  495  LYS A  504  1                                  10    
HELIX    6   6 PRO A  505  GLY A  507  5                                   3    
HELIX    7   7 LEU A  508  LYS A  526  1                                  19    
HELIX    8   8 TYR A  530  LEU A  534  5                                   5    
HELIX    9   9 GLY A  538  CYS A  549  1                                  12    
HELIX   10  10 GLU A  552  VAL A  556  5                                   5    
HELIX   11  11 ASP A  560  ASN A  573  1                                  14    
LINK         O3'  DG C   6                 P   3DR C   7     1555   1555  1.66  
LINK         O3' 3DR C   7                 P    DG C   8     1555   1555  1.61  
CISPEP   1 LYS A  437    TRP A  438          0        -6.56                     
SITE     1 AC1  4 ARG A 468   DC C   5   DG C   6   DG D   6                    
CRYST1   41.070   55.840   96.650  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.024349  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.017908  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.010347        0.00000