PDB Short entry for 5AOX HEADER TRANSLATION 12-SEP-15 5AOX TITLE HUMAN ALU RNA RETROTRANSPOSITION COMPLEX IN THE RIBOSOME-STALLING TITLE 2 CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN; COMPND 3 CHAIN: A, D; COMPND 4 FRAGMENT: UNP RESIDUES 2-86; COMPND 5 SYNONYM: SRP9; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: SIGNAL RECOGNITION PARTICLE 14 KDA PROTEIN; COMPND 10 CHAIN: B, E; COMPND 11 FRAGMENT: UNP RESIDUES 2-95; COMPND 12 SYNONYM: SRP14,18 KDA ALU RNA-BINDING PROTEIN, SRP14; COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: ALU JO CONSENSUS RNA; COMPND 17 CHAIN: C, F; COMPND 18 FRAGMENT: ALU JO LEFT TRUNCATED MONOMER; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA II; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET3A; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_VARIANT: ROSETTA II; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PETM41; SOURCE 19 MOL_ID: 3; SOURCE 20 SYNTHETIC: YES; SOURCE 21 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 22 ORGANISM_TAXID: 32630 KEYWDS TRANSLATION, RETROTRANSPOSITION, PROTEIN TARGETING, RNA, MOBILE DNA, KEYWDS 2 SINE, LINE, RIBONUCLEOPROTEIN PARTICLE, SIGNAL RECOGNITION PARTICLE EXPDTA X-RAY DIFFRACTION AUTHOR V.AHL,O.WEICHENRIEDER REVDAT 4 23-OCT-19 5AOX 1 LINK ATOM REVDAT 3 23-DEC-15 5AOX 1 JRNL REVDAT 2 02-DEC-15 5AOX 1 JRNL REVDAT 1 11-NOV-15 5AOX 0 JRNL AUTH V.AHL,H.KELLER,S.SCHMIDT,O.WEICHENRIEDER JRNL TITL RETROTRANSPOSITION AND CRYSTAL STRUCTURE OF AN ALU RNP IN JRNL TITL 2 THE RIBOSOME-STALLING CONFORMATION. JRNL REF MOL.CELL V. 60 715 2015 JRNL REFN ISSN 1097-2765 JRNL PMID 26585389 JRNL DOI 10.1016/J.MOLCEL.2015.10.003 REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 49531 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1539 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 56.7676 - 4.5363 0.99 4483 131 0.1604 0.1818 REMARK 3 2 4.5363 - 3.6008 0.99 4404 138 0.1431 0.1872 REMARK 3 3 3.6008 - 3.1457 0.99 4351 148 0.1566 0.1902 REMARK 3 4 3.1457 - 2.8581 1.00 4390 151 0.1898 0.2274 REMARK 3 5 2.8581 - 2.6532 1.00 4380 137 0.2123 0.2537 REMARK 3 6 2.6532 - 2.4968 1.00 4331 127 0.2254 0.2438 REMARK 3 7 2.4968 - 2.3718 1.00 4336 148 0.2300 0.2872 REMARK 3 8 2.3718 - 2.2685 1.00 4322 158 0.2447 0.2902 REMARK 3 9 2.2685 - 2.1812 0.99 4375 141 0.2526 0.2642 REMARK 3 10 2.1812 - 2.1059 0.99 4348 132 0.2634 0.3093 REMARK 3 11 2.1059 - 2.0401 0.98 4272 128 0.2823 0.3305 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 6732 REMARK 3 ANGLE : 0.723 9938 REMARK 3 CHIRALITY : 0.034 1244 REMARK 3 PLANARITY : 0.003 601 REMARK 3 DIHEDRAL : 13.472 3039 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 29 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 2:6) REMARK 3 ORIGIN FOR THE GROUP (A): 28.0401 -1.0122 34.7206 REMARK 3 T TENSOR REMARK 3 T11: 0.2580 T22: 0.4413 REMARK 3 T33: 0.3061 T12: -0.0991 REMARK 3 T13: -0.0780 T23: -0.1235 REMARK 3 L TENSOR REMARK 3 L11: 1.0581 L22: 1.0678 REMARK 3 L33: 0.7945 L12: 0.1896 REMARK 3 L13: 0.7412 L23: 0.4543 REMARK 3 S TENSOR REMARK 3 S11: 0.2243 S12: -0.1949 S13: -0.1054 REMARK 3 S21: 0.2499 S22: 0.0798 S23: -0.2564 REMARK 3 S31: 0.3314 S32: -0.0943 S33: 0.6590 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 7:20) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4820 5.4655 29.2256 REMARK 3 T TENSOR REMARK 3 T11: 0.3130 T22: 0.1498 REMARK 3 T33: 0.3533 T12: -0.0536 REMARK 3 T13: 0.0901 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 3.2189 L22: 0.9409 REMARK 3 L33: 4.2027 L12: -0.3420 REMARK 3 L13: 0.9744 L23: -1.9844 REMARK 3 S TENSOR REMARK 3 S11: -0.0874 S12: -0.2589 S13: 0.6018 REMARK 3 S21: 0.2470 S22: -0.1433 S23: 0.0560 REMARK 3 S31: -1.0030 S32: 0.2063 S33: -0.6102 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 21:25) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4254 0.6156 16.6565 REMARK 3 T TENSOR REMARK 3 T11: 0.3326 T22: 0.2730 REMARK 3 T33: 0.4077 T12: 0.0436 REMARK 3 T13: 0.0389 T23: 0.0461 REMARK 3 L TENSOR REMARK 3 L11: 0.0285 L22: 0.0446 REMARK 3 L33: 0.0354 L12: 0.0031 REMARK 3 L13: 0.0183 L23: 0.0343 REMARK 3 S TENSOR REMARK 3 S11: -0.0373 S12: 0.6874 S13: -0.2061 REMARK 3 S21: -0.2994 S22: -0.2856 S23: -0.1235 REMARK 3 S31: -0.2901 S32: 0.1206 S33: 0.0004 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 26:55) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9001 -7.7166 33.0103 REMARK 3 T TENSOR REMARK 3 T11: 0.1665 T22: 0.1815 REMARK 3 T33: 0.1976 T12: 0.0046 REMARK 3 T13: -0.0193 T23: -0.0221 REMARK 3 L TENSOR REMARK 3 L11: 1.0033 L22: 0.8676 REMARK 3 L33: 0.4365 L12: 0.1993 REMARK 3 L13: -0.3120 L23: 0.3658 REMARK 3 S TENSOR REMARK 3 S11: 0.1626 S12: -0.2173 S13: 0.0235 REMARK 3 S21: 0.1752 S22: -0.0570 S23: -0.1178 REMARK 3 S31: -0.0950 S32: 0.3212 S33: -0.0053 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 56:74) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0082 1.3426 33.4688 REMARK 3 T TENSOR REMARK 3 T11: 0.2669 T22: 0.3261 REMARK 3 T33: 0.2678 T12: -0.0247 REMARK 3 T13: 0.0459 T23: -0.1198 REMARK 3 L TENSOR REMARK 3 L11: 0.3465 L22: 0.6706 REMARK 3 L33: 4.4226 L12: 0.4645 REMARK 3 L13: -0.4418 L23: -1.0148 REMARK 3 S TENSOR REMARK 3 S11: 0.0228 S12: -0.4190 S13: 0.3731 REMARK 3 S21: 0.3558 S22: -0.0359 S23: 0.2970 REMARK 3 S31: -0.5528 S32: -0.9289 S33: 1.1709 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 75:77) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5987 8.9019 17.3842 REMARK 3 T TENSOR REMARK 3 T11: 0.5792 T22: 0.2279 REMARK 3 T33: 0.3845 T12: 0.0511 REMARK 3 T13: -0.0996 T23: 0.0909 REMARK 3 L TENSOR REMARK 3 L11: 3.7296 L22: 7.0152 REMARK 3 L33: 2.0000 L12: 4.8902 REMARK 3 L13: -6.5114 L23: -9.6891 REMARK 3 S TENSOR REMARK 3 S11: 0.0688 S12: 0.1733 S13: 0.1817 REMARK 3 S21: -0.3041 S22: -0.0048 S23: -0.1284 REMARK 3 S31: -0.4191 S32: -0.0537 S33: 0.1330 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 2:22) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3443 -15.3516 32.3417 REMARK 3 T TENSOR REMARK 3 T11: 0.1909 T22: 0.2617 REMARK 3 T33: 0.2727 T12: -0.0161 REMARK 3 T13: 0.0249 T23: 0.0224 REMARK 3 L TENSOR REMARK 3 L11: 0.0049 L22: 1.1315 REMARK 3 L33: 2.5528 L12: -0.0341 REMARK 3 L13: -0.0673 L23: -0.1983 REMARK 3 S TENSOR REMARK 3 S11: 0.0256 S12: -0.2398 S13: -0.3787 REMARK 3 S21: -0.0164 S22: 0.0462 S23: 0.4149 REMARK 3 S31: 0.2787 S32: -0.8639 S33: -0.1619 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND ((RESSEQ 23:32) OR (RESSEQ 55:75)) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4367 -10.3441 25.3310 REMARK 3 T TENSOR REMARK 3 T11: 0.1317 T22: 0.1409 REMARK 3 T33: 0.1970 T12: 0.0476 REMARK 3 T13: -0.0037 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 0.7823 L22: 0.3940 REMARK 3 L33: 0.8925 L12: 0.1602 REMARK 3 L13: -0.1714 L23: 0.4263 REMARK 3 S TENSOR REMARK 3 S11: -0.0243 S12: 0.1074 S13: -0.0598 REMARK 3 S21: 0.0806 S22: 0.0175 S23: 0.2098 REMARK 3 S31: -0.0040 S32: -0.1339 S33: -0.0976 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 33:40) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9122 -7.0116 9.5200 REMARK 3 T TENSOR REMARK 3 T11: 0.3526 T22: 0.3027 REMARK 3 T33: 0.3706 T12: 0.0877 REMARK 3 T13: 0.0137 T23: 0.0467 REMARK 3 L TENSOR REMARK 3 L11: 0.6601 L22: 3.3077 REMARK 3 L33: 0.3604 L12: 0.7578 REMARK 3 L13: 0.1893 L23: -0.6463 REMARK 3 S TENSOR REMARK 3 S11: 0.3579 S12: 0.3657 S13: 0.0132 REMARK 3 S21: -1.1337 S22: -0.4926 S23: -0.5989 REMARK 3 S31: 0.1621 S32: -0.1655 S33: 0.0278 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 49:54) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2200 0.9915 10.8241 REMARK 3 T TENSOR REMARK 3 T11: 0.4760 T22: 0.4337 REMARK 3 T33: 0.3365 T12: 0.2443 REMARK 3 T13: -0.0116 T23: 0.1394 REMARK 3 L TENSOR REMARK 3 L11: 0.0243 L22: 0.0677 REMARK 3 L33: 0.2016 L12: -0.0311 REMARK 3 L13: -0.0651 L23: 0.0507 REMARK 3 S TENSOR REMARK 3 S11: 0.0494 S12: 0.1460 S13: 0.0618 REMARK 3 S21: -0.1457 S22: -0.0912 S23: -0.0559 REMARK 3 S31: -0.0348 S32: 0.0207 S33: 0.3066 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 76:95) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7937 -4.7737 37.4599 REMARK 3 T TENSOR REMARK 3 T11: 0.2238 T22: 0.1687 REMARK 3 T33: 0.2408 T12: 0.0470 REMARK 3 T13: 0.0115 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 1.7620 L22: 1.9550 REMARK 3 L33: 0.5801 L12: 0.0109 REMARK 3 L13: -0.9621 L23: -0.3275 REMARK 3 S TENSOR REMARK 3 S11: -0.2077 S12: -0.4071 S13: 0.1813 REMARK 3 S21: 0.5279 S22: -0.1231 S23: -0.0487 REMARK 3 S31: -0.3106 S32: -0.2228 S33: -0.7206 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND ((RESSEQ 1:33) OR (RESSEQ 41:48)) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5731 -26.8902 17.4699 REMARK 3 T TENSOR REMARK 3 T11: 0.1600 T22: 0.1731 REMARK 3 T33: 0.2437 T12: 0.0082 REMARK 3 T13: 0.0221 T23: -0.0451 REMARK 3 L TENSOR REMARK 3 L11: 0.7967 L22: 1.3049 REMARK 3 L33: 0.9630 L12: 0.1805 REMARK 3 L13: 0.1166 L23: 0.0633 REMARK 3 S TENSOR REMARK 3 S11: -0.0305 S12: 0.1994 S13: -0.2096 REMARK 3 S21: -0.0583 S22: -0.0275 S23: 0.0167 REMARK 3 S31: 0.2573 S32: -0.1382 S33: 0.0177 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 34:40) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4129 -37.0104 9.0565 REMARK 3 T TENSOR REMARK 3 T11: 0.3744 T22: 0.3052 REMARK 3 T33: 0.4525 T12: -0.0672 REMARK 3 T13: 0.1019 T23: -0.0487 REMARK 3 L TENSOR REMARK 3 L11: 0.4312 L22: 0.3496 REMARK 3 L33: 0.3312 L12: -0.3569 REMARK 3 L13: 0.1912 L23: -0.0382 REMARK 3 S TENSOR REMARK 3 S11: 0.1715 S12: 0.2732 S13: 0.7393 REMARK 3 S21: -0.1917 S22: -0.0364 S23: 0.3845 REMARK 3 S31: -0.2236 S32: 0.0863 S33: 0.0009 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND ((RESSEQ 49:64) OR (RESSEQ 102:118)) REMARK 3 ORIGIN FOR THE GROUP (A): 30.3371 -15.6943 13.5994 REMARK 3 T TENSOR REMARK 3 T11: 0.1648 T22: 0.2395 REMARK 3 T33: 0.2133 T12: 0.0255 REMARK 3 T13: 0.0167 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 1.5533 L22: 1.7608 REMARK 3 L33: 1.4239 L12: 0.1562 REMARK 3 L13: -0.6674 L23: 0.2321 REMARK 3 S TENSOR REMARK 3 S11: -0.1294 S12: 0.2420 S13: -0.1343 REMARK 3 S21: -0.1177 S22: 0.0128 S23: -0.2110 REMARK 3 S31: -0.0791 S32: 0.3081 S33: -0.1131 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND ((RESSEQ 65:69) OR (RESSEQ 99:101)) REMARK 3 ORIGIN FOR THE GROUP (A): 45.6326 -17.7233 38.8026 REMARK 3 T TENSOR REMARK 3 T11: 0.8172 T22: 0.6771 REMARK 3 T33: 0.4753 T12: -0.0121 REMARK 3 T13: -0.2466 T23: 0.0185 REMARK 3 L TENSOR REMARK 3 L11: 4.2256 L22: 1.2736 REMARK 3 L33: 3.3746 L12: -1.4540 REMARK 3 L13: -1.9842 L23: -0.0498 REMARK 3 S TENSOR REMARK 3 S11: 0.0705 S12: -0.4495 S13: 0.7098 REMARK 3 S21: -0.3934 S22: -0.3143 S23: -0.1942 REMARK 3 S31: -1.3147 S32: 0.6714 S33: 0.6715 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 2:6) REMARK 3 ORIGIN FOR THE GROUP (A): 51.7656 -3.4785 46.7611 REMARK 3 T TENSOR REMARK 3 T11: 0.7570 T22: 0.3276 REMARK 3 T33: 0.6248 T12: 0.0307 REMARK 3 T13: -0.1826 T23: 0.0408 REMARK 3 L TENSOR REMARK 3 L11: 0.3881 L22: 0.5982 REMARK 3 L33: 0.2515 L12: -0.0824 REMARK 3 L13: -0.3009 L23: 0.1669 REMARK 3 S TENSOR REMARK 3 S11: -0.4593 S12: 0.2470 S13: -0.0928 REMARK 3 S21: -0.2112 S22: -0.2497 S23: 0.1193 REMARK 3 S31: -0.5182 S32: -0.4634 S33: -0.1026 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 7:20) REMARK 3 ORIGIN FOR THE GROUP (A): 58.8212 3.0688 52.6291 REMARK 3 T TENSOR REMARK 3 T11: 0.5026 T22: 0.2889 REMARK 3 T33: 1.1477 T12: -0.0283 REMARK 3 T13: -0.0408 T23: -0.0910 REMARK 3 L TENSOR REMARK 3 L11: 0.2915 L22: 3.0992 REMARK 3 L33: 1.1515 L12: 0.3471 REMARK 3 L13: -0.2550 L23: 0.8679 REMARK 3 S TENSOR REMARK 3 S11: -0.0146 S12: -0.0154 S13: 0.3304 REMARK 3 S21: -0.8974 S22: 0.2553 S23: 0.0143 REMARK 3 S31: -0.2716 S32: 0.0393 S33: 0.2292 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 21:25) REMARK 3 ORIGIN FOR THE GROUP (A): 61.2769 -0.4699 66.5840 REMARK 3 T TENSOR REMARK 3 T11: 0.2740 T22: 0.6379 REMARK 3 T33: 0.7396 T12: -0.0917 REMARK 3 T13: 0.0366 T23: -0.2977 REMARK 3 L TENSOR REMARK 3 L11: 0.0116 L22: 0.0497 REMARK 3 L33: 0.0645 L12: -0.0241 REMARK 3 L13: 0.0275 L23: -0.0567 REMARK 3 S TENSOR REMARK 3 S11: 0.0445 S12: -0.2104 S13: 0.2985 REMARK 3 S21: 0.0440 S22: 0.0034 S23: 0.3562 REMARK 3 S31: -0.0342 S32: -0.1404 S33: 0.1413 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 26:55) REMARK 3 ORIGIN FOR THE GROUP (A): 59.5913 -10.3045 50.5591 REMARK 3 T TENSOR REMARK 3 T11: 0.4454 T22: 0.2472 REMARK 3 T33: 0.3981 T12: -0.1126 REMARK 3 T13: -0.0529 T23: -0.0667 REMARK 3 L TENSOR REMARK 3 L11: 1.0425 L22: 1.1812 REMARK 3 L33: 0.4471 L12: -0.8691 REMARK 3 L13: 0.3370 L23: 0.1083 REMARK 3 S TENSOR REMARK 3 S11: -0.1773 S12: 0.1920 S13: 0.4739 REMARK 3 S21: -0.5069 S22: -0.0782 S23: 0.3491 REMARK 3 S31: -0.1268 S32: -0.1198 S33: -0.2468 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 56:74) REMARK 3 ORIGIN FOR THE GROUP (A): 68.7097 -1.2877 50.1394 REMARK 3 T TENSOR REMARK 3 T11: 0.5328 T22: 0.3232 REMARK 3 T33: 0.6124 T12: -0.1305 REMARK 3 T13: 0.0142 T23: 0.0878 REMARK 3 L TENSOR REMARK 3 L11: 0.2453 L22: 0.3391 REMARK 3 L33: 0.3976 L12: -0.0774 REMARK 3 L13: 0.3094 L23: -0.0462 REMARK 3 S TENSOR REMARK 3 S11: -0.2186 S12: 0.3050 S13: 0.6012 REMARK 3 S21: -0.4340 S22: -0.1200 S23: 0.4164 REMARK 3 S31: -0.0454 S32: 0.4076 S33: -0.0202 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'E' AND (RESSEQ 2:22) REMARK 3 ORIGIN FOR THE GROUP (A): 76.7872 -17.8340 53.9426 REMARK 3 T TENSOR REMARK 3 T11: 0.2621 T22: 0.5768 REMARK 3 T33: 0.3876 T12: -0.0555 REMARK 3 T13: 0.0560 T23: -0.1449 REMARK 3 L TENSOR REMARK 3 L11: 1.1285 L22: 1.4615 REMARK 3 L33: 2.9558 L12: 0.1930 REMARK 3 L13: 1.6473 L23: -0.6025 REMARK 3 S TENSOR REMARK 3 S11: -0.2327 S12: -0.2573 S13: -0.4003 REMARK 3 S21: -0.1579 S22: 0.2014 S23: -0.7649 REMARK 3 S31: 0.1074 S32: 0.8080 S33: -0.4327 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'E' AND ((RESSEQ 23:32) OR (RESSEQ 55:75)) REMARK 3 ORIGIN FOR THE GROUP (A): 71.1004 -12.1086 59.8973 REMARK 3 T TENSOR REMARK 3 T11: 0.3315 T22: 0.3757 REMARK 3 T33: 0.3104 T12: -0.1098 REMARK 3 T13: 0.0391 T23: -0.1525 REMARK 3 L TENSOR REMARK 3 L11: 0.2255 L22: 0.2912 REMARK 3 L33: 0.7994 L12: -0.2537 REMARK 3 L13: 0.4250 L23: -0.4842 REMARK 3 S TENSOR REMARK 3 S11: -0.0660 S12: -0.2991 S13: 0.2082 REMARK 3 S21: -0.0032 S22: 0.1612 S23: -0.3332 REMARK 3 S31: -0.1565 S32: 0.3959 S33: 0.0606 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'E' AND (RESSEQ 33:40) REMARK 3 ORIGIN FOR THE GROUP (A): 68.7257 -7.4575 75.1557 REMARK 3 T TENSOR REMARK 3 T11: 0.3980 T22: 0.6639 REMARK 3 T33: 0.4446 T12: -0.1356 REMARK 3 T13: -0.0585 T23: -0.2716 REMARK 3 L TENSOR REMARK 3 L11: 0.1450 L22: 0.0135 REMARK 3 L33: 0.0465 L12: 0.0449 REMARK 3 L13: -0.0824 L23: -0.0253 REMARK 3 S TENSOR REMARK 3 S11: 0.1327 S12: -0.0708 S13: -0.0546 REMARK 3 S21: -0.0248 S22: 0.0649 S23: -0.0703 REMARK 3 S31: 0.1662 S32: 0.1198 S33: 1.2283 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'E' AND (RESSEQ 51:54) REMARK 3 ORIGIN FOR THE GROUP (A): 72.7407 1.8097 70.9437 REMARK 3 T TENSOR REMARK 3 T11: 1.0259 T22: 0.7915 REMARK 3 T33: 1.0383 T12: -0.3494 REMARK 3 T13: -0.2430 T23: -0.3493 REMARK 3 L TENSOR REMARK 3 L11: 0.0397 L22: 0.0160 REMARK 3 L33: 0.0078 L12: -0.0251 REMARK 3 L13: 0.0176 L23: -0.0111 REMARK 3 S TENSOR REMARK 3 S11: 0.0174 S12: 0.0027 S13: 0.0251 REMARK 3 S21: -0.0177 S22: 0.0077 S23: 0.0691 REMARK 3 S31: 0.0408 S32: -0.0103 S33: 0.7906 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'E' AND (RESSEQ 76:95) REMARK 3 ORIGIN FOR THE GROUP (A): 74.9034 -7.6547 47.7324 REMARK 3 T TENSOR REMARK 3 T11: 0.6141 T22: 0.4572 REMARK 3 T33: 0.4705 T12: -0.2526 REMARK 3 T13: 0.0544 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 3.9328 L22: 0.1648 REMARK 3 L33: 2.2866 L12: -0.3066 REMARK 3 L13: 2.7566 L23: 0.0087 REMARK 3 S TENSOR REMARK 3 S11: -0.6369 S12: 0.4333 S13: 0.8442 REMARK 3 S21: -0.5826 S22: 0.0862 S23: -0.1880 REMARK 3 S31: -0.2170 S32: 0.0517 S33: -0.4158 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'F' AND ((RESSEQ 1:33) OR (RESSEQ 41:48)) REMARK 3 ORIGIN FOR THE GROUP (A): 62.3250 -28.2851 68.4132 REMARK 3 T TENSOR REMARK 3 T11: 0.2942 T22: 0.4523 REMARK 3 T33: 0.1524 T12: -0.0566 REMARK 3 T13: 0.0084 T23: -0.0346 REMARK 3 L TENSOR REMARK 3 L11: 0.8305 L22: 1.0227 REMARK 3 L33: 1.9369 L12: -0.8330 REMARK 3 L13: -0.2512 L23: -0.2931 REMARK 3 S TENSOR REMARK 3 S11: -0.1550 S12: -0.6127 S13: -0.0530 REMARK 3 S21: 0.0898 S22: 0.1201 S23: -0.0756 REMARK 3 S31: 0.2575 S32: -0.0413 S33: -0.0671 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'F' AND (RESSEQ 34:40) REMARK 3 ORIGIN FOR THE GROUP (A): 55.7083 -37.8025 76.7989 REMARK 3 T TENSOR REMARK 3 T11: 0.4697 T22: 0.8234 REMARK 3 T33: 0.3494 T12: -0.0256 REMARK 3 T13: 0.1061 T23: 0.1477 REMARK 3 L TENSOR REMARK 3 L11: 1.6633 L22: 2.2718 REMARK 3 L33: 0.5037 L12: -1.4503 REMARK 3 L13: -0.8632 L23: 0.5167 REMARK 3 S TENSOR REMARK 3 S11: 0.1634 S12: -0.3301 S13: 0.2035 REMARK 3 S21: 0.0796 S22: -0.0800 S23: -0.2379 REMARK 3 S31: -0.0527 S32: -0.5810 S33: 0.0767 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'F' AND ((RESSEQ 49:64) OR (RESSEQ 102:118)) REMARK 3 ORIGIN FOR THE GROUP (A): 47.3542 -16.5614 69.3623 REMARK 3 T TENSOR REMARK 3 T11: 0.3227 T22: 0.7188 REMARK 3 T33: 0.3233 T12: 0.0425 REMARK 3 T13: -0.0388 T23: -0.1942 REMARK 3 L TENSOR REMARK 3 L11: 0.1952 L22: 1.9721 REMARK 3 L33: 1.9800 L12: 0.5547 REMARK 3 L13: -0.1257 L23: 0.1406 REMARK 3 S TENSOR REMARK 3 S11: -0.1491 S12: -0.5163 S13: 0.3010 REMARK 3 S21: -0.0387 S22: 0.0174 S23: 0.3590 REMARK 3 S31: -0.1379 S32: -0.3770 S33: 0.1655 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'F' AND ((RESSEQ 65:69) OR (RESSEQ 99:101)) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0876 -15.6457 42.1433 REMARK 3 T TENSOR REMARK 3 T11: 0.9337 T22: 0.6869 REMARK 3 T33: 0.6526 T12: 0.1342 REMARK 3 T13: -0.3407 T23: -0.0160 REMARK 3 L TENSOR REMARK 3 L11: 7.8207 L22: 2.3684 REMARK 3 L33: 7.9378 L12: 1.1996 REMARK 3 L13: -6.0837 L23: 0.5817 REMARK 3 S TENSOR REMARK 3 S11: 0.2243 S12: -0.0013 S13: 1.6329 REMARK 3 S21: -0.1747 S22: -0.1590 S23: 0.5311 REMARK 3 S31: -1.9172 S32: -0.6513 S33: 2.4473 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE FOLLOWING RESIDUES ARE DISORDERED. REMARK 3 CHAIN A, RESIDUES 78 TO 86. CHAIN B, RESIDUES 41 TO 48. CHAIN C, REMARK 3 RESIDUES 68, 69. CHAIN D, RESIDUES 75 TO 86. CHAIN E, RESIDUES REMARK 3 41 TO 50. CHAIN F, RESIDUES 57, 69. THE FOLLOWING RESIDUES WERE REMARK 3 TRUNCATED AT THE CB POSITIONS. CHAIN A, RESIDUES 76, 77. CHAIN B, REMARK 3 RESIDUE 50. MG ION COORDINATION WAS RESTRAINED. HYDROGENS WERE REMARK 3 ADDED IN THE RIDING POSITIONS. REMARK 4 REMARK 4 5AOX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1290065021. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : DYNAMICALLY BENDABLE MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49534 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 56.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.550 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.18 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.66000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.030 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1E8O CHAINS A AND B REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NA-MES,PH=6.4, 30%PEG400, PH 6.4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 40.74000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.36500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 40.74000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.36500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -84.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 78 REMARK 465 ARG A 79 REMARK 465 ASN A 80 REMARK 465 VAL A 81 REMARK 465 THR A 82 REMARK 465 MET A 83 REMARK 465 GLU A 84 REMARK 465 THR A 85 REMARK 465 GLU A 86 REMARK 465 PRO B 41 REMARK 465 LYS B 42 REMARK 465 LYS B 43 REMARK 465 GLY B 44 REMARK 465 THR B 45 REMARK 465 VAL B 46 REMARK 465 GLU B 47 REMARK 465 GLY B 48 REMARK 465 ALA D 75 REMARK 465 LYS D 76 REMARK 465 GLU D 77 REMARK 465 ALA D 78 REMARK 465 ARG D 79 REMARK 465 ASN D 80 REMARK 465 VAL D 81 REMARK 465 THR D 82 REMARK 465 MET D 83 REMARK 465 GLU D 84 REMARK 465 THR D 85 REMARK 465 GLU D 86 REMARK 465 PRO E 41 REMARK 465 LYS E 42 REMARK 465 LYS E 43 REMARK 465 GLY E 44 REMARK 465 THR E 45 REMARK 465 VAL E 46 REMARK 465 GLU E 47 REMARK 465 GLY E 48 REMARK 465 PHE E 49 REMARK 465 GLU E 50 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 76 CG CD CE NZ REMARK 470 GLU A 77 CG CD OE1 OE2 REMARK 470 GLU B 50 CG CD OE1 OE2 REMARK 470 C C 68 C5' C4' O4' C3' O3' C2' O2' REMARK 470 C C 68 C1' N1 C2 O2 N3 C4 N4 REMARK 470 C C 68 C5 C6 REMARK 470 A C 69 P OP1 OP2 O5' C5' C4' O4' REMARK 470 A C 69 C3' C2' O2' C1' N9 C8 N7 REMARK 470 A C 69 C5 C6 N6 N1 C2 N3 C4 REMARK 470 A F 57 C5' C4' O4' C3' C2' O2' C1' REMARK 470 A F 57 N9 C8 N7 C5 C6 N6 N1 REMARK 470 A F 57 C2 N3 C4 REMARK 470 A F 69 C5' C4' O4' C3' C2' O2' C1' REMARK 470 A F 69 N9 C8 N7 C5 C6 N6 N1 REMARK 470 A F 69 C2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 21 84.78 -166.19 REMARK 500 LYS B 64 -59.38 -127.75 REMARK 500 SER E 23 147.39 -172.43 REMARK 500 LYS E 64 -63.18 -135.91 REMARK 500 MET E 91 64.62 -103.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C1101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G C 59 O6 REMARK 620 2 HOH C2110 O 89.5 REMARK 620 3 HOH C2111 O 87.5 89.4 REMARK 620 4 HOH C2113 O 88.4 175.9 87.0 REMARK 620 5 HOH C2112 O 92.9 93.3 177.2 90.2 REMARK 620 6 A C 57 OP2 178.3 91.7 93.7 90.6 85.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C1111 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U C 17 O2' REMARK 620 2 G C 41 O6 91.8 REMARK 620 3 HOH C2047 O 88.5 92.6 REMARK 620 4 HOH C2086 O 177.5 85.8 91.5 REMARK 620 5 HOH C2046 O 89.8 93.9 173.3 90.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C1131 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 C C 108 OP1 REMARK 620 2 HOH C2015 O 90.3 REMARK 620 3 HOH C2011 O 87.3 94.2 REMARK 620 4 HOH C2012 O 176.4 89.1 89.2 REMARK 620 5 HOH C2141 O 89.8 177.6 88.2 90.9 REMARK 620 6 HOH C2142 O 93.0 87.7 178.1 90.5 89.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F1131 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH F2010 O REMARK 620 2 HOH F2061 O 179.4 REMARK 620 3 HOH F2062 O 90.7 89.8 REMARK 620 4 HOH F2066 O 89.6 90.6 90.9 REMARK 620 5 HOH F2007 O 90.9 88.6 178.3 88.7 REMARK 620 6 C F 108 OP1 89.3 90.4 89.8 178.8 90.7 REMARK 620 N 1 2 3 4 5 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 1011 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG C 1051 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 1111 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 1131 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT F 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 F 1011 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG F 1131 REMARK 999 REMARK 999 SEQUENCE REMARK 999 TRUNCATED HUMAN LEFT ALU JO MONOMER CONSENSUS SEQUENCE DBREF 5AOX A 2 86 UNP P49458 SRP09_HUMAN 2 86 DBREF 5AOX B 2 95 UNP P37108 SRP14_HUMAN 2 95 DBREF 5AOX D 2 86 UNP P49458 SRP09_HUMAN 2 86 DBREF 5AOX E 2 95 UNP P37108 SRP14_HUMAN 2 95 DBREF 5AOX C 1 118 PDB 5AOX 5AOX 1 118 DBREF 5AOX F 1 118 PDB 5AOX 5AOX 1 118 SEQADV 5AOX SER A 48 UNP P49458 CYS 48 ENGINEERED MUTATION SEQADV 5AOX GLY B 2 UNP P37108 VAL 2 ENGINEERED MUTATION SEQADV 5AOX ALA B 3 UNP P37108 LEU 3 ENGINEERED MUTATION SEQADV 5AOX MET B 4 UNP P37108 LEU 4 ENGINEERED MUTATION SEQADV 5AOX SER D 48 UNP P49458 CYS 48 ENGINEERED MUTATION SEQADV 5AOX GLY E 2 UNP P37108 VAL 2 ENGINEERED MUTATION SEQADV 5AOX ALA E 3 UNP P37108 LEU 3 ENGINEERED MUTATION SEQADV 5AOX MET E 4 UNP P37108 LEU 4 ENGINEERED MUTATION SEQRES 1 A 85 PRO GLN TYR GLN THR TRP GLU GLU PHE SER ARG ALA ALA SEQRES 2 A 85 GLU LYS LEU TYR LEU ALA ASP PRO MET LYS ALA ARG VAL SEQRES 3 A 85 VAL LEU LYS TYR ARG HIS SER ASP GLY ASN LEU CYS VAL SEQRES 4 A 85 LYS VAL THR ASP ASP LEU VAL SER LEU VAL TYR LYS THR SEQRES 5 A 85 ASP GLN ALA GLN ASP VAL LYS LYS ILE GLU LYS PHE HIS SEQRES 6 A 85 SER GLN LEU MET ARG LEU MET VAL ALA LYS GLU ALA ARG SEQRES 7 A 85 ASN VAL THR MET GLU THR GLU SEQRES 1 B 94 GLY ALA MET GLU SER GLU GLN PHE LEU THR GLU LEU THR SEQRES 2 B 94 ARG LEU PHE GLN LYS CYS ARG THR SER GLY SER VAL TYR SEQRES 3 B 94 ILE THR LEU LYS LYS TYR ASP GLY ARG THR LYS PRO ILE SEQRES 4 B 94 PRO LYS LYS GLY THR VAL GLU GLY PHE GLU PRO ALA ASP SEQRES 5 B 94 ASN LYS CYS LEU LEU ARG ALA THR ASP GLY LYS LYS LYS SEQRES 6 B 94 ILE SER THR VAL VAL SER SER LYS GLU VAL ASN LYS PHE SEQRES 7 B 94 GLN MET ALA TYR SER ASN LEU LEU ARG ALA ASN MET ASP SEQRES 8 B 94 GLY LEU LYS SEQRES 1 C 87 GDP G C C G G G C G C G G U SEQRES 2 C 87 G G C U C A C G C C U G U SEQRES 3 C 87 A A U C C C A G C A C U U SEQRES 4 C 87 U G G G A G G C C G A G G SEQRES 5 C 87 C G G G A G G A U C G C G SEQRES 6 C 87 A A C A C G C G A G A C C SEQRES 7 C 87 C C G U C U C U A SEQRES 1 D 85 PRO GLN TYR GLN THR TRP GLU GLU PHE SER ARG ALA ALA SEQRES 2 D 85 GLU LYS LEU TYR LEU ALA ASP PRO MET LYS ALA ARG VAL SEQRES 3 D 85 VAL LEU LYS TYR ARG HIS SER ASP GLY ASN LEU CYS VAL SEQRES 4 D 85 LYS VAL THR ASP ASP LEU VAL SER LEU VAL TYR LYS THR SEQRES 5 D 85 ASP GLN ALA GLN ASP VAL LYS LYS ILE GLU LYS PHE HIS SEQRES 6 D 85 SER GLN LEU MET ARG LEU MET VAL ALA LYS GLU ALA ARG SEQRES 7 D 85 ASN VAL THR MET GLU THR GLU SEQRES 1 E 94 GLY ALA MET GLU SER GLU GLN PHE LEU THR GLU LEU THR SEQRES 2 E 94 ARG LEU PHE GLN LYS CYS ARG THR SER GLY SER VAL TYR SEQRES 3 E 94 ILE THR LEU LYS LYS TYR ASP GLY ARG THR LYS PRO ILE SEQRES 4 E 94 PRO LYS LYS GLY THR VAL GLU GLY PHE GLU PRO ALA ASP SEQRES 5 E 94 ASN LYS CYS LEU LEU ARG ALA THR ASP GLY LYS LYS LYS SEQRES 6 E 94 ILE SER THR VAL VAL SER SER LYS GLU VAL ASN LYS PHE SEQRES 7 E 94 GLN MET ALA TYR SER ASN LEU LEU ARG ALA ASN MET ASP SEQRES 8 E 94 GLY LEU LYS SEQRES 1 F 87 GDP G C C G G G C G C G G U SEQRES 2 F 87 G G C U C A C G C C U G U SEQRES 3 F 87 A A U C C C A G C A C U U SEQRES 4 F 87 U G G G A G G C C G A G G SEQRES 5 F 87 C G G G A G G A U C G C G SEQRES 6 F 87 A A C A C G C G A G A C C SEQRES 7 F 87 C C G U C U C U A MODRES 5AOX GDP C 1 G GUANOSINE-5'-DIPHOSPHATE MODRES 5AOX GDP F 1 G GUANOSINE-5'-DIPHOSPHATE HET GDP C 1 37 HET GDP F 1 37 HET ACT C1001 7 HET SO4 C1011 5 HET PEG C1051 7 HET MG C1101 1 HET MG C1111 1 HET MG C1131 1 HET ACT F1001 7 HET SO4 F1011 5 HET MG F1131 1 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM ACT ACETATE ION HETNAM SO4 SULFATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM MG MAGNESIUM ION FORMUL 3 GDP 2(C10 H15 N5 O11 P2) FORMUL 7 ACT 2(C2 H3 O2 1-) FORMUL 8 SO4 2(O4 S 2-) FORMUL 9 PEG C4 H10 O3 FORMUL 10 MG 4(MG 2+) FORMUL 16 HOH *381(H2 O) HELIX 1 1 TRP A 7 ALA A 20 1 14 HELIX 2 2 GLN A 57 MET A 73 1 17 HELIX 3 3 SER B 6 LYS B 19 1 14 HELIX 4 4 VAL B 76 ASN B 90 1 15 HELIX 5 5 TRP D 7 TYR D 18 1 12 HELIX 6 6 GLN D 57 LEU D 72 1 16 HELIX 7 7 SER E 6 LYS E 19 1 14 HELIX 8 8 SER E 73 ASN E 90 1 18 SHEET 1 AA 7 GLN A 3 TYR A 4 0 SHEET 2 AA 7 SER A 48 THR A 53 1 O VAL A 50 N TYR A 4 SHEET 3 AA 7 ASN A 37 THR A 43 -1 O LEU A 38 N THR A 53 SHEET 4 AA 7 ARG A 26 ARG A 32 -1 O ARG A 26 N THR A 43 SHEET 5 AA 7 VAL B 26 LYS B 32 -1 O VAL B 26 N TYR A 31 SHEET 6 AA 7 LYS B 55 THR B 61 -1 O LEU B 57 N LYS B 31 SHEET 7 AA 7 LYS B 66 SER B 72 -1 O ILE B 67 N ALA B 60 SHEET 1 DA 6 SER D 48 THR D 53 0 SHEET 2 DA 6 ASN D 37 THR D 43 -1 O LEU D 38 N THR D 53 SHEET 3 DA 6 ARG D 26 ARG D 32 -1 O ARG D 26 N THR D 43 SHEET 4 DA 6 VAL E 26 TYR E 33 -1 O VAL E 26 N TYR D 31 SHEET 5 DA 6 LYS E 55 THR E 61 -1 O LYS E 55 N TYR E 33 SHEET 6 DA 6 LYS E 66 SER E 72 -1 O ILE E 67 N ALA E 60 LINK O3' GDP C 1 P G C 2 1555 1555 1.61 LINK MG MG C1101 O6 G C 59 1555 1555 2.10 LINK MG MG C1101 O HOH C2110 1555 1555 2.10 LINK MG MG C1101 O HOH C2111 1555 1555 2.10 LINK MG MG C1101 O HOH C2113 1555 1555 2.09 LINK MG MG C1101 O HOH C2112 1555 1555 2.10 LINK MG MG C1101 OP2 A C 57 1555 1555 2.10 LINK MG MG C1111 O2' U C 17 1555 1555 2.60 LINK MG MG C1111 O6 G C 41 1555 1555 2.21 LINK MG MG C1111 O HOH C2047 1555 1555 2.10 LINK MG MG C1111 O HOH C2086 1555 1555 2.10 LINK MG MG C1111 O HOH C2046 1555 1555 2.10 LINK MG MG C1131 OP1 C C 108 1555 1555 2.10 LINK MG MG C1131 O HOH C2015 1555 1555 2.10 LINK MG MG C1131 O HOH C2011 1555 1555 2.10 LINK MG MG C1131 O HOH C2012 1555 1555 2.10 LINK MG MG C1131 O HOH C2141 1555 1555 2.11 LINK MG MG C1131 O HOH C2142 1555 1555 2.10 LINK O3' GDP F 1 P G F 2 1555 1555 1.61 LINK MG MG F1131 O HOH F2010 1555 1555 2.11 LINK MG MG F1131 O HOH F2061 1555 1555 2.10 LINK MG MG F1131 O HOH F2062 1555 1555 2.10 LINK MG MG F1131 O HOH F2066 1555 1555 2.10 LINK MG MG F1131 O HOH F2007 1555 1555 2.10 LINK MG MG F1131 OP1 C F 108 1555 1555 2.10 SITE 1 AC1 4 THR B 61 HOH B2027 U C 24 G C 25 SITE 1 AC2 2 C C 3 C C 4 SITE 1 AC3 8 TYR B 33 SER B 68 VAL B 70 HOH B2048 SITE 2 AC3 8 A C 27 A C 28 HOH C2155 HOH C2156 SITE 1 AC4 6 A C 57 G C 59 HOH C2110 HOH C2111 SITE 2 AC4 6 HOH C2112 HOH C2113 SITE 1 AC5 5 U C 17 G C 41 HOH C2046 HOH C2047 SITE 2 AC5 5 HOH C2086 SITE 1 AC6 6 C C 108 HOH C2011 HOH C2012 HOH C2015 SITE 2 AC6 6 HOH C2141 HOH C2142 SITE 1 AC7 3 THR E 61 U F 24 G F 25 SITE 1 AC8 3 C F 3 C F 4 HOH F2047 SITE 1 AC9 6 C F 108 HOH F2007 HOH F2010 HOH F2061 SITE 2 AC9 6 HOH F2062 HOH F2066 CRYST1 81.480 56.730 170.590 90.00 93.69 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012273 0.000000 0.000792 0.00000 SCALE2 0.000000 0.017627 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005874 0.00000