PDB Short entry for 5LPN
HEADER    ENDOCYTOSIS                             14-AUG-16   5LPN              
TITLE     STRUCTURE OF HUMAN RAB10 IN COMPLEX WITH THE BMERB DOMAIN OF MICAL-1  
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: RAS-RELATED PROTEIN RAB-10;                                
COMPND   3 CHAIN: A, C;                                                         
COMPND   4 ENGINEERED: YES;                                                     
COMPND   5 MOL_ID: 2;                                                           
COMPND   6 MOLECULE: PROTEIN-METHIONINE SULFOXIDE OXIDASE MICAL1;               
COMPND   7 CHAIN: B;                                                            
COMPND   8 FRAGMENT: UNP RESIDUES 918-1067;                                     
COMPND   9 SYNONYM: MOLECULE INTERACTING WITH CASL PROTEIN 1,MICAL-1,NEDD9-     
COMPND  10 INTERACTING PROTEIN WITH CALPONIN HOMOLOGY AND LIM DOMAINS;          
COMPND  11 EC: 1.14.13.-;                                                       
COMPND  12 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: RAB10;                                                         
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 MOL_ID: 2;                                                           
SOURCE   9 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE  10 ORGANISM_COMMON: HUMAN;                                              
SOURCE  11 ORGANISM_TAXID: 9606;                                                
SOURCE  12 GENE: MICAL1, MICAL, NICAL;                                          
SOURCE  13 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  14 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    MICAL-1, DUF3585, MICAL, RAB EFFECTOR, RAB10, OXIDOREDUCTASE,         
KEYWDS   2 ENDOCYTOSIS                                                          
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    A.RAI,A.OPRISKO,J.CAMPOS,Y.FU,T.FRIESE,A.ITZEN,R.S.GOODY,M.P.MUELLER, 
AUTHOR   2 E.M.GAZDAG                                                           
REVDAT   4   06-SEP-17 5LPN    1       REMARK                                   
REVDAT   3   14-SEP-16 5LPN    1       JRNL                                     
REVDAT   2   07-SEP-16 5LPN    1       JRNL                                     
REVDAT   1   24-AUG-16 5LPN    0                                                
JRNL        AUTH   A.RAI,A.OPRISKO,J.CAMPOS,Y.FU,T.FRIESE,A.ITZEN,R.S.GOODY,    
JRNL        AUTH 2 E.M.GAZDAG,M.P.MULLER                                        
JRNL        TITL   BMERB DOMAINS ARE BIVALENT RAB8 FAMILY EFFECTORS EVOLVED BY  
JRNL        TITL 2 GENE DUPLICATION.                                            
JRNL        REF    ELIFE                         V.   5       2016              
JRNL        REFN                   ESSN 2050-084X                               
JRNL        PMID   27552051                                                     
JRNL        DOI    10.7554/ELIFE.18675                                          
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.80 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (1.10_2155: ???)                              
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 44.00                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.390                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.6                           
REMARK   3   NUMBER OF REFLECTIONS             : 17499                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.246                           
REMARK   3   R VALUE            (WORKING SET) : 0.244                           
REMARK   3   FREE R VALUE                     : 0.287                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 875                             
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 44.0098 -  5.0859    1.00     2948   156  0.2306 0.2546        
REMARK   3     2  5.0859 -  4.0377    1.00     2792   147  0.2153 0.2747        
REMARK   3     3  4.0377 -  3.5276    1.00     2757   145  0.2508 0.2762        
REMARK   3     4  3.5276 -  3.2051    0.99     2709   141  0.2692 0.3281        
REMARK   3     5  3.2051 -  2.9755    0.99     2713   143  0.2927 0.3729        
REMARK   3     6  2.9755 -  2.8001    0.99     2705   143  0.3052 0.3662        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : NULL                                          
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.420            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.750           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.008           3793                                  
REMARK   3   ANGLE     :  1.118           5125                                  
REMARK   3   CHIRALITY :  0.060            589                                  
REMARK   3   PLANARITY :  0.006            644                                  
REMARK   3   DIHEDRAL  : 20.515           2282                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 1                                          
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    SELECTION: ALL                                                    
REMARK   3    ORIGIN FOR THE GROUP (A):   1.7086  73.9068 216.9504              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.3390 T22:   0.3542                                     
REMARK   3      T33:   0.3078 T12:   0.0622                                     
REMARK   3      T13:  -0.0207 T23:  -0.0427                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   0.7826 L22:   0.7247                                     
REMARK   3      L33:   1.0177 L12:  -0.5522                                     
REMARK   3      L13:   0.2051 L23:  -0.6177                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.0376 S12:  -0.2198 S13:  -0.1146                       
REMARK   3      S21:   0.2532 S22:   0.1731 S23:  -0.0524                       
REMARK   3      S31:  -0.2518 S32:  -0.1436 S33:   0.0247                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5LPN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-AUG-16.                  
REMARK 100 THE DEPOSITION ID IS D_1200001091.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 20-SEP-15                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 7.6-8.0                            
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SLS                                
REMARK 200  BEAMLINE                       : X10SA                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.99997                            
REMARK 200  MONOCHROMATOR                  : SI(111)                            
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS 6M                 
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : XDS                                
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 17508                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.800                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 44.004                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.6                               
REMARK 200  DATA REDUNDANCY                : 12.70                              
REMARK 200  R MERGE                    (I) : 0.11800                            
REMARK 200  R SYM                      (I) : 0.12300                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 14.1200                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.90                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.9                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 12.60                              
REMARK 200  R MERGE FOR SHELL          (I) : 0.72300                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 3.250                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: 4LHW AND 5SZG                                        
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 58.07                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 6%-10% PEG8000 0.1M IMIDAZOLE, VAPOR     
REMARK 280  DIFFUSION, HANGING DROP, TEMPERATURE 293K                           
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       29.19500            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       99.09000            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       29.50000            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       99.09000            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       29.19500            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       29.50000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 5980 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 23450 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY A    -1                                                      
REMARK 465     HIS A     0                                                      
REMARK 465     MET A     1                                                      
REMARK 465     ALA A     2                                                      
REMARK 465     LYS A     3                                                      
REMARK 465     LYS A     4                                                      
REMARK 465     GLY B   915                                                      
REMARK 465     HIS B   916                                                      
REMARK 465     MET B   917                                                      
REMARK 465     MET B  1015                                                      
REMARK 465     ASN B  1016                                                      
REMARK 465     ARG B  1017                                                      
REMARK 465     GLU B  1018                                                      
REMARK 465     GLU B  1019                                                      
REMARK 465     ASN B  1020                                                      
REMARK 465     LEU B  1021                                                      
REMARK 465     LYS B  1022                                                      
REMARK 465     THR B  1023                                                      
REMARK 465     ALA B  1024                                                      
REMARK 465     ALA B  1025                                                      
REMARK 465     LEU B  1061                                                      
REMARK 465     GLY B  1062                                                      
REMARK 465     THR B  1063                                                      
REMARK 465     GLY B  1064                                                      
REMARK 465     ALA B  1065                                                      
REMARK 465     GLN B  1066                                                      
REMARK 465     GLY B  1067                                                      
REMARK 465     GLY C    -1                                                      
REMARK 465     HIS C     0                                                      
REMARK 465     MET C     1                                                      
REMARK 465     ALA C     2                                                      
REMARK 465     LYS C     3                                                      
REMARK 465     LYS C     4                                                      
REMARK 465     THR C     5                                                      
REMARK 465     ARG C   147                                                      
REMARK 465     PHE C   148                                                      
REMARK 465     PHE C   149                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     GLN A  54    CG   CD   OE1  NE2                                  
REMARK 470     ARG A  80    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS B 918    CG   CD   CE   NZ                                   
REMARK 470     GLU B 919    CG   CD   OE1  OE2                                  
REMARK 470     GLU B 920    CG   CD   OE1  OE2                                  
REMARK 470     GLU B 921    CG   CD   OE1  OE2                                  
REMARK 470     MET B 922    CG   SD   CE                                        
REMARK 470     LYS B 923    CG   CD   CE   NZ                                   
REMARK 470     ARG B 924    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     PHE B 925    CG   CD1  CD2  CE1  CE2  CZ                         
REMARK 470     LYS B 927    CG   CD   CE   NZ                                   
REMARK 470     LYS B 951    CG   CD   CE   NZ                                   
REMARK 470     LEU B 974    CG   CD1  CD2                                       
REMARK 470     LYS B 980    CG   CD   CE   NZ                                   
REMARK 470     ASP B1026    CG   OD1  OD2                                       
REMARK 470     ARG B1027    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLN B1028    CG   CD   OE1  NE2                                  
REMARK 470     GLN B1032    CG   CD   OE1  NE2                                  
REMARK 470     LYS B1036    CG   CD   CE   NZ                                   
REMARK 470     GLU B1058    CG   CD   OE1  OE2                                  
REMARK 470     ARG C  28    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS C  56    CG   CD   CE   NZ                                   
REMARK 470     ARG C  80    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ASP C 108    CG   OD1  OD2                                       
REMARK 470     GLU C 113    CG   CD   OE1  OE2                                  
REMARK 470     ASP C 114    CG   OD1  OD2                                       
REMARK 470     ARG C 142    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ARG C 172    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS C 173    CG   CD   CE   NZ                                   
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    LYS C    95     OE2  GLU C    98              1.43            
REMARK 500   O    LYS C    95     CD   GLU C    98              1.86            
REMARK 500   OD1  ASP A    17     NE1  TRP A   103              2.08            
REMARK 500   NH1  ARG A   130     O    VAL A   132              2.12            
REMARK 500   CD1  TYR C    89     CE2  PHE C    97              2.14            
REMARK 500   O    PHE A    29     NZ   LYS A    49              2.15            
REMARK 500   O    LEU A   171     OG1  THR A   174              2.16            
REMARK 500   OE1  GLN A    68     N    ARG A    70              2.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500    ARG A 105   NE    ARG A 105   CZ     -0.089                       
REMARK 500    ARG A 105   CZ    ARG A 105   NH1    -0.092                       
REMARK 500    TRP C 103   CB    TRP C 103   CG     -0.135                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    LEU B 956   CB  -  CG  -  CD1 ANGL. DEV. = -12.6 DEGREES          
REMARK 500    TYR C  89   CB  -  CG  -  CD1 ANGL. DEV. =  -5.1 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    LYS A 123       44.93     70.23                                   
REMARK 500    LYS A 173       37.70    -97.01                                   
REMARK 500    ALA B 955      -38.42    -38.49                                   
REMARK 500    THR C  73      -71.76    -60.21                                   
REMARK 500    ASN C 158       16.60     47.75                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG A 201  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 THR A  23   OG1                                                    
REMARK 620 2 THR A  41   OG1  99.3                                              
REMARK 620 3 GNP A 202   O3G 147.5  95.9                                        
REMARK 620 4 GNP A 202   O2B  78.7 172.5  82.4                                  
REMARK 620 5 HOH A 301   O    74.3  96.4  75.6  76.1                            
REMARK 620 6 HOH A 302   O   101.7 121.2  94.5  66.2 142.1                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG C 201  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 THR C  23   OG1                                                    
REMARK 620 2 THR C  41   OG1  83.7                                              
REMARK 620 3 HOH C 302   O    75.1  91.4                                        
REMARK 620 4 GNP C 202   O2G 152.4 100.3  77.5                                  
REMARK 620 5 GNP C 202   O1B  90.4 160.0  68.6  76.5                            
REMARK 620 6 HOH C 301   O   111.9 109.0 158.8  92.8  90.9                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 201                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue GNP A 202                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 201                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue GNP C 202                 
DBREF  5LPN A    1   175  UNP    P61026   RAB10_HUMAN      1    175             
DBREF  5LPN B  918  1067  UNP    Q8TDZ2   MICA1_HUMAN    918   1067             
DBREF  5LPN C    1   175  UNP    P61026   RAB10_HUMAN      1    175             
SEQADV 5LPN GLY A   -1  UNP  P61026              EXPRESSION TAG                 
SEQADV 5LPN HIS A    0  UNP  P61026              EXPRESSION TAG                 
SEQADV 5LPN GLY B  915  UNP  Q8TDZ2              EXPRESSION TAG                 
SEQADV 5LPN HIS B  916  UNP  Q8TDZ2              EXPRESSION TAG                 
SEQADV 5LPN MET B  917  UNP  Q8TDZ2              EXPRESSION TAG                 
SEQADV 5LPN GLY C   -1  UNP  P61026              EXPRESSION TAG                 
SEQADV 5LPN HIS C    0  UNP  P61026              EXPRESSION TAG                 
SEQRES   1 A  177  GLY HIS MET ALA LYS LYS THR TYR ASP LEU LEU PHE LYS          
SEQRES   2 A  177  LEU LEU LEU ILE GLY ASP SER GLY VAL GLY LYS THR CYS          
SEQRES   3 A  177  VAL LEU PHE ARG PHE SER ASP ASP ALA PHE ASN THR THR          
SEQRES   4 A  177  PHE ILE SER THR ILE GLY ILE ASP PHE LYS ILE LYS THR          
SEQRES   5 A  177  VAL GLU LEU GLN GLY LYS LYS ILE LYS LEU GLN ILE TRP          
SEQRES   6 A  177  ASP THR ALA GLY GLN GLU ARG PHE HIS THR ILE THR THR          
SEQRES   7 A  177  SER TYR TYR ARG GLY ALA MET GLY ILE MET LEU VAL TYR          
SEQRES   8 A  177  ASP ILE THR ASN GLY LYS SER PHE GLU ASN ILE SER LYS          
SEQRES   9 A  177  TRP LEU ARG ASN ILE ASP GLU HIS ALA ASN GLU ASP VAL          
SEQRES  10 A  177  GLU ARG MET LEU LEU GLY ASN LYS CYS ASP MET ASP ASP          
SEQRES  11 A  177  LYS ARG VAL VAL PRO LYS GLY LYS GLY GLU GLN ILE ALA          
SEQRES  12 A  177  ARG GLU HIS GLY ILE ARG PHE PHE GLU THR SER ALA LYS          
SEQRES  13 A  177  ALA ASN ILE ASN ILE GLU LYS ALA PHE LEU THR LEU ALA          
SEQRES  14 A  177  GLU ASP ILE LEU ARG LYS THR PRO                              
SEQRES   1 B  153  GLY HIS MET LYS GLU GLU GLU MET LYS ARG PHE CYS LYS          
SEQRES   2 B  153  ALA GLN THR ILE GLN ARG ARG LEU ASN GLU ILE GLU ALA          
SEQRES   3 B  153  ALA LEU ARG GLU LEU GLU ALA GLU GLY VAL LYS LEU GLU          
SEQRES   4 B  153  LEU ALA LEU ARG ARG GLN SER SER SER PRO GLU GLN GLN          
SEQRES   5 B  153  LYS LYS LEU TRP VAL GLY GLN LEU LEU GLN LEU VAL ASP          
SEQRES   6 B  153  LYS LYS ASN SER LEU VAL ALA GLU GLU ALA GLU LEU MET          
SEQRES   7 B  153  ILE THR VAL GLN GLU LEU ASN LEU GLU GLU LYS GLN TRP          
SEQRES   8 B  153  GLN LEU ASP GLN GLU LEU ARG GLY TYR MET ASN ARG GLU          
SEQRES   9 B  153  GLU ASN LEU LYS THR ALA ALA ASP ARG GLN ALA GLU ASP          
SEQRES  10 B  153  GLN VAL LEU ARG LYS LEU VAL ASP LEU VAL ASN GLN ARG          
SEQRES  11 B  153  ASP ALA LEU ILE ARG PHE GLN GLU GLU ARG ARG LEU SER          
SEQRES  12 B  153  GLU LEU ALA LEU GLY THR GLY ALA GLN GLY                      
SEQRES   1 C  177  GLY HIS MET ALA LYS LYS THR TYR ASP LEU LEU PHE LYS          
SEQRES   2 C  177  LEU LEU LEU ILE GLY ASP SER GLY VAL GLY LYS THR CYS          
SEQRES   3 C  177  VAL LEU PHE ARG PHE SER ASP ASP ALA PHE ASN THR THR          
SEQRES   4 C  177  PHE ILE SER THR ILE GLY ILE ASP PHE LYS ILE LYS THR          
SEQRES   5 C  177  VAL GLU LEU GLN GLY LYS LYS ILE LYS LEU GLN ILE TRP          
SEQRES   6 C  177  ASP THR ALA GLY GLN GLU ARG PHE HIS THR ILE THR THR          
SEQRES   7 C  177  SER TYR TYR ARG GLY ALA MET GLY ILE MET LEU VAL TYR          
SEQRES   8 C  177  ASP ILE THR ASN GLY LYS SER PHE GLU ASN ILE SER LYS          
SEQRES   9 C  177  TRP LEU ARG ASN ILE ASP GLU HIS ALA ASN GLU ASP VAL          
SEQRES  10 C  177  GLU ARG MET LEU LEU GLY ASN LYS CYS ASP MET ASP ASP          
SEQRES  11 C  177  LYS ARG VAL VAL PRO LYS GLY LYS GLY GLU GLN ILE ALA          
SEQRES  12 C  177  ARG GLU HIS GLY ILE ARG PHE PHE GLU THR SER ALA LYS          
SEQRES  13 C  177  ALA ASN ILE ASN ILE GLU LYS ALA PHE LEU THR LEU ALA          
SEQRES  14 C  177  GLU ASP ILE LEU ARG LYS THR PRO                              
HET     MG  A 201       1                                                       
HET    GNP  A 202      32                                                       
HET     MG  C 201       1                                                       
HET    GNP  C 202      32                                                       
HETNAM      MG MAGNESIUM ION                                                    
HETNAM     GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER                      
FORMUL   4   MG    2(MG 2+)                                                     
FORMUL   5  GNP    2(C10 H17 N6 O13 P3)                                         
FORMUL   8  HOH   *4(H2 O)                                                      
HELIX    1 AA1 GLY A   21  ASP A   32  1                                  12    
HELIX    2 AA2 GLN A   68  ARG A   70  5                                   3    
HELIX    3 AA3 PHE A   71  SER A   77  1                                   7    
HELIX    4 AA4 TYR A   78  ALA A   82  5                                   5    
HELIX    5 AA5 ASN A   93  ASN A   99  1                                   7    
HELIX    6 AA6 ASN A   99  ALA A  111  1                                  13    
HELIX    7 AA7 PRO A  133  GLY A  145  1                                  13    
HELIX    8 AA8 ASN A  158  LYS A  173  1                                  16    
HELIX    9 AA9 GLU B  919  SER B  960  1                                  42    
HELIX   10 AB1 SER B  962  GLN B  973  1                                  12    
HELIX   11 AB2 GLN B  973  TYR B 1014  1                                  42    
HELIX   12 AB3 ARG B 1027  ALA B 1060  1                                  34    
HELIX   13 AB4 GLY C   21  ASP C   32  1                                  12    
HELIX   14 AB5 GLU C   52  LYS C   56  5                                   5    
HELIX   15 AB6 GLN C   68  ARG C   80  5                                  13    
HELIX   16 AB7 ASN C   99  ALA C  111  1                                  13    
HELIX   17 AB8 PRO C  133  GLY C  145  1                                  13    
HELIX   18 AB9 ASN C  158  ARG C  172  1                                  15    
SHEET    1 AA1 6 ILE A  44  LEU A  53  0                                        
SHEET    2 AA1 6 LYS A  56  THR A  65 -1  O  LYS A  56   N  LEU A  53           
SHEET    3 AA1 6 LEU A   8  GLY A  16  1  N  LEU A   8   O  LYS A  59           
SHEET    4 AA1 6 GLY A  84  ASP A  90  1  O  MET A  86   N  LEU A  13           
SHEET    5 AA1 6 GLU A 116  ASN A 122  1  O  LEU A 120   N  LEU A  87           
SHEET    6 AA1 6 ARG A 147  THR A 151  1  O  PHE A 149   N  GLY A 121           
SHEET    1 AA2 5 ILE C  44  VAL C  51  0                                        
SHEET    2 AA2 5 ILE C  58  THR C  65 -1  O  ILE C  58   N  VAL C  51           
SHEET    3 AA2 5 LEU C   8  ILE C  15  1  N  LEU C  12   O  TRP C  63           
SHEET    4 AA2 5 GLY C  84  ASP C  90  1  O  VAL C  88   N  ILE C  15           
SHEET    5 AA2 5 MET C 118  ASN C 122  1  O  ASN C 122   N  TYR C  89           
LINK         OG1 THR A  23                MG    MG A 201     1555   1555  1.94  
LINK         OG1 THR A  41                MG    MG A 201     1555   1555  1.99  
LINK         OG1 THR C  23                MG    MG C 201     1555   1555  1.98  
LINK         OG1 THR C  41                MG    MG C 201     1555   1555  2.00  
LINK        MG    MG A 201                 O3G GNP A 202     1555   1555  1.93  
LINK        MG    MG A 201                 O2B GNP A 202     1555   1555  2.38  
LINK        MG    MG A 201                 O   HOH A 301     1555   1555  2.12  
LINK        MG    MG A 201                 O   HOH A 302     1555   1555  1.94  
LINK        MG    MG C 201                 O   HOH C 302     1555   1555  2.01  
LINK        MG    MG C 201                 O2G GNP C 202     1555   1555  1.92  
LINK        MG    MG C 201                 O1B GNP C 202     1555   1555  2.39  
LINK        MG    MG C 201                 O   HOH C 301     1555   1555  2.39  
SITE     1 AC1  6 THR A  23  THR A  41  ASP A  64  GNP A 202                    
SITE     2 AC1  6 HOH A 301  HOH A 302                                          
SITE     1 AC2 25 ASP A  17  SER A  18  GLY A  19  VAL A  20                    
SITE     2 AC2 25 GLY A  21  LYS A  22  THR A  23  CYS A  24                    
SITE     3 AC2 25 PHE A  34  ASN A  35  THR A  36  PHE A  38                    
SITE     4 AC2 25 SER A  40  THR A  41  GLY A  67  ASN A 122                    
SITE     5 AC2 25 LYS A 123  ASP A 125  MET A 126  SER A 152                    
SITE     6 AC2 25 ALA A 153  LYS A 154   MG A 201  HOH A 301                    
SITE     7 AC2 25 HOH A 302                                                     
SITE     1 AC3  5 THR C  23  THR C  41  GNP C 202  HOH C 301                    
SITE     2 AC3  5 HOH C 302                                                     
SITE     1 AC4 24 ASP C  17  SER C  18  GLY C  19  VAL C  20                    
SITE     2 AC4 24 GLY C  21  LYS C  22  THR C  23  CYS C  24                    
SITE     3 AC4 24 PHE C  34  ASN C  35  THR C  36  PHE C  38                    
SITE     4 AC4 24 THR C  41  GLY C  67  ASN C 122  LYS C 123                    
SITE     5 AC4 24 ASP C 125  MET C 126  SER C 152  ALA C 153                    
SITE     6 AC4 24 LYS C 154   MG C 201  HOH C 301  HOH C 302                    
CRYST1   58.390   59.000  198.180  90.00  90.00  90.00 P 21 21 21    8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.017126  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.016949  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.005046        0.00000