PDB Short entry for 6E5N
HEADER    MOTOR PROTEIN                           20-JUL-18   6E5N              
TITLE     SOLUTION STRUCTURE OF HUMAN MYOSIN VI ISOFORM 3 (1050-1131) IN COMPLEX
TITLE    2 WITH CLATHRIN LIGHT CHAIN A (46-61)                                  
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: UNCONVENTIONAL MYOSIN-VI;                                  
COMPND   3 CHAIN: B;                                                            
COMPND   4 SYNONYM: UNCONVENTIONAL MYOSIN-6;                                    
COMPND   5 ENGINEERED: YES;                                                     
COMPND   6 MOL_ID: 2;                                                           
COMPND   7 MOLECULE: CLATHRIN LIGHT CHAIN A;                                    
COMPND   8 CHAIN: A;                                                            
COMPND   9 SYNONYM: LCA;                                                        
COMPND  10 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: MYO6, KIAA0389;                                                
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 MOL_ID: 2;                                                           
SOURCE   9 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE  10 ORGANISM_COMMON: HUMAN;                                              
SOURCE  11 ORGANISM_TAXID: 9606;                                                
SOURCE  12 GENE: CLTA;                                                          
SOURCE  13 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  14 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    MYOSIN, CLATHRIN, TRAFFICKING, ENDOCYTOSIS, MOTOR PROTEIN             
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    G.R.BUEL,K.J.WALTERS                                                  
REVDAT   2   03-JUN-20 6E5N    1       JRNL                                     
REVDAT   1   20-NOV-19 6E5N    0                                                
JRNL        AUTH   M.BIANCOSPINO,G.R.BUEL,C.A.NINO,E.MASPERO,                   
JRNL        AUTH 2 R.SCOTTO DI PERROTOLO,A.RAIMONDI,L.REDLINGSHOFER,J.WEBER,    
JRNL        AUTH 3 F.M.BRODSKY,K.J.WALTERS,S.POLO                               
JRNL        TITL   CLATHRIN LIGHT CHAIN A DRIVES SELECTIVE MYOSIN VI            
JRNL        TITL 2 RECRUITMENT TO CLATHRIN-COATED PITS UNDER MEMBRANE TENSION.  
JRNL        REF    NAT COMMUN                    V.  10  4974 2019              
JRNL        REFN                   ESSN 2041-1723                               
JRNL        PMID   31672988                                                     
JRNL        DOI    10.1038/S41467-019-12855-6                                   
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : X-PLOR NIH                                           
REMARK   3   AUTHORS     : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE             
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 6E5N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUL-18.                  
REMARK 100 THE DEPOSITION ID IS D_1000235583.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 283.2                              
REMARK 210  PH                             : 6.5                                
REMARK 210  IONIC STRENGTH                 : 50 MM NACL, 20 MM NAPO4            
REMARK 210  PRESSURE                       : 760 MMHG                           
REMARK 210  SAMPLE CONTENTS                : 0.36 MM [U-13C; U-15N] MYOSIN VI   
REMARK 210                                   1050-1131, 0.36 MM NONE CLATHRIN   
REMARK 210                                   LIGHT CHAIN ALPHA 46-61, 95% H2O/  
REMARK 210                                   5% D2O; 0.4 MM NONE MYOSIN VI      
REMARK 210                                   1050-1131, 0.4 MM [U-13C; U-15N]   
REMARK 210                                   CLATHRIN LIGHT CHAIN ALPHA 46-61,  
REMARK 210                                   95% H2O/5% D2O                     
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 3D 1H-15N NOESY;   
REMARK 210                                   2D 1H-13C HSQC; 3D 1H-13C NOESY;   
REMARK 210                                   3D HNCO; 3D HNCACB; HALF-          
REMARK 210                                   FILTERED 3D 1H-13C NOESY           
REMARK 210  SPECTROMETER FIELD STRENGTH    : 850 MHZ; 700 MHZ                   
REMARK 210  SPECTROMETER MODEL             : AVANCE III                         
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : TOPSPIN, NMRPIPE, NMRDRAW,         
REMARK 210                                   XEASY, TALOS, X-PLOR NIH           
REMARK 210   METHOD USED                   : SIMULATED ANNEALING                
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 300                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465   MODELS 1-20                                                        
REMARK 465     RES C SSSEQI                                                     
REMARK 465     GLY B  1045                                                      
REMARK 465     PRO B  1046                                                      
REMARK 465     LEU B  1047                                                      
REMARK 465     GLY B  1048                                                      
REMARK 465     SER B  1049                                                      
REMARK 465     GLY A    38                                                      
REMARK 465     PRO A    39                                                      
REMARK 465     LEU A    40                                                      
REMARK 465     GLY A    41                                                      
REMARK 465     SER A    42                                                      
REMARK 465     PRO A    43                                                      
REMARK 465     GLU A    44                                                      
REMARK 465     PHE A    45                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 ASP A  56      -61.36   -148.78                                   
REMARK 500  2 ALA B1078      109.87    171.50                                   
REMARK 500  2 ALA B1079      -79.39    -63.30                                   
REMARK 500  2 ASP A  56      -62.21   -144.40                                   
REMARK 500  3 ASP A  56      -62.97   -150.94                                   
REMARK 500  4 LYS B1082       33.91    -89.93                                   
REMARK 500  4 ASP A  56      -61.45   -144.77                                   
REMARK 500  5 ALA B1071       72.90     48.06                                   
REMARK 500  5 ASP A  56      -62.05   -147.44                                   
REMARK 500  6 VAL B1072       19.77     58.89                                   
REMARK 500  6 ASP A  56      -62.62   -150.92                                   
REMARK 500  7 LYS B1052      -65.00   -123.18                                   
REMARK 500  7 ALA B1077      -66.08   -159.87                                   
REMARK 500  7 ALA B1078       82.23     53.18                                   
REMARK 500  7 ASP A  56      -61.82   -150.71                                   
REMARK 500  8 ALA B1071       90.59     47.34                                   
REMARK 500  8 LEU B1073       40.09   -107.94                                   
REMARK 500  8 ASP A  56      -62.08   -150.31                                   
REMARK 500  9 LYS B1129      -61.04   -123.76                                   
REMARK 500  9 ASP A  56      -60.58   -150.23                                   
REMARK 500 10 ASP A  56      -62.16   -149.74                                   
REMARK 500 11 LYS B1129      -62.58   -127.33                                   
REMARK 500 11 ASP A  56      -61.39   -144.34                                   
REMARK 500 12 ALA B1079      117.94   -166.05                                   
REMARK 500 12 ASP A  56      -61.87   -150.47                                   
REMARK 500 13 ALA B1071       27.66   -177.80                                   
REMARK 500 13 ASP A  56      -63.65   -151.60                                   
REMARK 500 14 ALA B1078      -80.74    -72.93                                   
REMARK 500 14 ALA B1079     -179.31    176.00                                   
REMARK 500 14 ASP A  56      -62.79   -144.17                                   
REMARK 500 15 ALA B1074       28.52     47.96                                   
REMARK 500 15 LYS B1129      -63.86   -127.50                                   
REMARK 500 15 ASP A  56      -62.14   -147.67                                   
REMARK 500 16 ASP A  56      -61.92   -156.91                                   
REMARK 500 17 ASP A  56      -63.26   -148.90                                   
REMARK 500 18 LYS B1052      -64.39   -122.66                                   
REMARK 500 18 LEU B1073       19.05     57.47                                   
REMARK 500 18 THR B1075      -31.12   -130.67                                   
REMARK 500 18 ASP A  56      -61.42   -143.98                                   
REMARK 500 19 LYS B1082      -75.00   -119.64                                   
REMARK 500 19 ASP A  56      -61.29   -155.69                                   
REMARK 500 20 ALA B1078       27.69     48.47                                   
REMARK 500 20 ASP A  56      -61.68   -149.62                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 30500   RELATED DB: BMRB                                 
REMARK 900 STRUCTURE OF A PROTEIN COMPLEX                                       
DBREF  6E5N B 1050  1131  UNP    Q9UM54   MYO6_HUMAN    1041   1122             
DBREF  6E5N A   46    61  UNP    P09496   CLCA_HUMAN      46     61             
SEQADV 6E5N GLY B 1045  UNP  Q9UM54              EXPRESSION TAG                 
SEQADV 6E5N PRO B 1046  UNP  Q9UM54              EXPRESSION TAG                 
SEQADV 6E5N LEU B 1047  UNP  Q9UM54              EXPRESSION TAG                 
SEQADV 6E5N GLY B 1048  UNP  Q9UM54              EXPRESSION TAG                 
SEQADV 6E5N SER B 1049  UNP  Q9UM54              EXPRESSION TAG                 
SEQADV 6E5N GLY A   38  UNP  P09496              EXPRESSION TAG                 
SEQADV 6E5N PRO A   39  UNP  P09496              EXPRESSION TAG                 
SEQADV 6E5N LEU A   40  UNP  P09496              EXPRESSION TAG                 
SEQADV 6E5N GLY A   41  UNP  P09496              EXPRESSION TAG                 
SEQADV 6E5N SER A   42  UNP  P09496              EXPRESSION TAG                 
SEQADV 6E5N PRO A   43  UNP  P09496              EXPRESSION TAG                 
SEQADV 6E5N GLU A   44  UNP  P09496              EXPRESSION TAG                 
SEQADV 6E5N PHE A   45  UNP  P09496              EXPRESSION TAG                 
SEQRES   1 B   87  GLY PRO LEU GLY SER ARG PRO LYS MET THR PRO GLU GLN          
SEQRES   2 B   87  MET ALA LYS GLU MET SER GLU PHE LEU SER ARG GLY PRO          
SEQRES   3 B   87  ALA VAL LEU ALA THR LYS ALA ALA ALA GLY THR LYS LYS          
SEQRES   4 B   87  TYR ASP LEU SER LYS TRP LYS TYR ALA GLU LEU ARG ASP          
SEQRES   5 B   87  THR ILE ASN THR SER CYS ASP ILE GLU LEU LEU ALA ALA          
SEQRES   6 B   87  CYS ARG GLU GLU PHE HIS ARG ARG LEU LYS VAL TYR HIS          
SEQRES   7 B   87  ALA TRP LYS SER LYS ASN LYS LYS ARG                          
SEQRES   1 A   24  GLY PRO LEU GLY SER PRO GLU PHE ILE GLU ASN ASP GLU          
SEQRES   2 A   24  ALA PHE ALA ILE LEU ASP GLY GLY ALA PRO GLY                  
HELIX    1 AA1 THR B 1054  GLY B 1069  1                                  16    
HELIX    2 AA2 THR B 1075  ALA B 1079  5                                   5    
HELIX    3 AA3 LYS B 1090  SER B 1101  1                                  12    
HELIX    4 AA4 ASP B 1103  LYS B 1130  1                                  28    
HELIX    5 AA5 GLU A   47  LEU A   55  1                                   9    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000