HEADSC 104l COMMNT S2C correlation file created: Fri Dec 26 23:13:28 EST 2003 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT www.fccc.edu/research/labs/dubrack/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD A M MET MET 1 1 C C - SEQCRD A N ASN ASN 2 2 H C 5 SEQCRD A I ILE ILE 3 3 H H - SEQCRD A F PHE PHE 4 4 H H - SEQCRD A E GLU GLU 5 5 H H - SEQCRD A M MET MET 6 6 H H - SEQCRD A L LEU LEU 7 7 H H - SEQCRD A R ARG ARG 8 8 H H - SEQCRD A I ILE ILE 9 9 H H - SEQCRD A D ASP ASP 10 10 H H - SEQCRD A E GLU GLU 11 11 H H - SEQCRD A G GLY GLY 12 12 C C - SEQCRD A L LEU LEU 13 13 C C - SEQCRD A R ARG ARG 14 14 C E 5 SEQCRD A L LEU LEU 15 15 C E 5 SEQCRD A K LYS LYS 16 16 C E 5 SEQCRD A I ILE ILE 17 17 C E 5 SEQCRD A Y TYR TYR 18 18 E E - SEQCRD A K LYS LYS 19 19 E E - SEQCRD A D ASP ASP 20 20 C E 5 SEQCRD A T THR THR 21 21 C T 5 SEQCRD A E GLU GLU 22 22 C T 5 SEQCRD A G GLY GLY 23 23 C T 5 SEQCRD A Y TYR TYR 24 24 C E 5 SEQCRD A Y TYR TYR 25 25 E E - SEQCRD A T THR THR 26 26 E E - SEQCRD A I ILE ILE 27 27 E E - SEQCRD A G GLY GLY 28 28 C E 5 SEQCRD A I ILE ILE 29 29 C T 5 SEQCRD A G GLY GLY 30 30 C T 5 SEQCRD A H HIS HIS 31 31 E E - SEQCRD A L LEU LEU 32 32 E E - SEQCRD A L LEU LEU 33 33 E E - SEQCRD A T THR THR 34 34 E E - SEQCRD A K LYS LYS 35 35 C C - SEQCRD A S SER SER 36 36 C T 5 SEQCRD A P PRO PRO 37 37 C T 5 SEQCRD A S SER SER 38 38 C T 5 SEQCRD A L LEU LEU 39 39 C T 5 SEQCRD A N ASN ASN 40 40 H C 5 SEQCRD A A ALA ALA 41 41 H H - SEQCRD A A ALA ALA 42 42 H H - SEQCRD A K LYS LYS 43 43 H H - SEQCRD A S SER SER 44 44 H H - SEQCRD A A ALA ALA 45 44A H H 4 SEQCRD A A ALA ALA 46 44B H H 4 SEQCRD A E GLU GLU 47 45 H H 4 SEQCRD A L LEU LEU 48 46 H H 4 SEQCRD A D ASP ASP 49 47 H H 4 SEQCRD A K LYS LYS 50 48 H H 4 SEQCRD A A ALA ALA 51 49 H H 4 SEQCRD A I ILE ILE 52 50 H H 4 SEQCRD A G GLY GLY 53 51 H C 45 SEQCRD A R ARG ARG 54 52 C C 4 SEQCRD A N ASN ASN 55 53 C C 4 SEQCRD A T THR THR 56 54 C T 45 SEQCRD A N ASN ASN 57 55 C T 45 SEQCRD A G GLY GLY 58 56 C T 45 SEQCRD A V VAL VAL 59 57 C B 45 SEQCRD A I ILE ILE 60 58 C C 4 SEQCRD A T THR THR 61 59 H C 45 SEQCRD A K LYS LYS 62 60 H H 4 SEQCRD A D ASP ASP 63 61 H H 4 SEQCRD A E GLU GLU 64 62 H H 4 SEQCRD A A ALA ALA 65 63 H H 4 SEQCRD A E GLU GLU 66 64 H H 4 SEQCRD A K LYS LYS 67 65 H H 4 SEQCRD A L LEU LEU 68 66 H H 4 SEQCRD A F PHE PHE 69 67 H H 4 SEQCRD A N ASN ASN 70 68 H H 4 SEQCRD A Q GLN GLN 71 69 H H 4 SEQCRD A D ASP ASP 72 70 H H 4 SEQCRD A V VAL VAL 73 71 H H 4 SEQCRD A D ASP ASP 74 72 H H 4 SEQCRD A A ALA ALA 75 73 H H 4 SEQCRD A A ALA ALA 76 74 H H 4 SEQCRD A V VAL VAL 77 75 H H 4 SEQCRD A R ARG ARG 78 76 H H 4 SEQCRD A G GLY GLY 79 77 H H 4 SEQCRD A I ILE ILE 80 78 H H 4 SEQCRD A L LEU LEU 81 79 H H 4 SEQCRD A R ARG ARG 82 80 C C 4 SEQCRD A N ASN ASN 83 81 C T 45 SEQCRD A A ALA ALA 84 82 C T 45 SEQCRD A K LYS LYS 85 83 C T 45 SEQCRD A L LEU LEU 86 84 H H 4 SEQCRD A K LYS LYS 87 85 H H 4 SEQCRD A P PRO PRO 88 86 H H 4 SEQCRD A V VAL VAL 89 87 H H 4 SEQCRD A Y TYR TYR 90 88 H H 4 SEQCRD A D ASP ASP 91 89 H H 4 SEQCRD A S SER SER 92 90 H H 4 SEQCRD A L LEU LEU 93 91 H C 45 SEQCRD A D ASP ASP 94 92 H C 45 SEQCRD A A ALA ALA 95 93 H H 4 SEQCRD A V VAL VAL 96 94 H H 4 SEQCRD A R ARG ARG 97 95 H H 4 SEQCRD A R ARG ARG 98 96 H H 4 SEQCRD A A ALA ALA 99 97 H H 4 SEQCRD A A ALA ALA 100 98 H H 4 SEQCRD A L LEU LEU 101 99 H H 4 SEQCRD A I ILE ILE 102 100 H H 4 SEQCRD A N ASN ASN 103 101 H H 4 SEQCRD A M MET MET 104 102 H H 4 SEQCRD A V VAL VAL 105 103 H H 4 SEQCRD A F PHE PHE 106 104 H H 4 SEQCRD A Q GLN GLN 107 105 H H 4 SEQCRD A M MET MET 108 106 H H 4 SEQCRD A G GLY GLY 109 107 H C 45 SEQCRD A E GLU GLU 110 108 H H 4 SEQCRD A T THR THR 111 109 H H 4 SEQCRD A G GLY GLY 112 110 H H 4 SEQCRD A V VAL VAL 113 111 H H 4 SEQCRD A A ALA ALA 114 112 H H 4 SEQCRD A G GLY GLY 115 113 H H 4 SEQCRD A F PHE PHE 116 114 H C 45 SEQCRD A T THR THR 117 115 H H 4 SEQCRD A N ASN ASN 118 116 H H 4 SEQCRD A S SER SER 119 117 H H 4 SEQCRD A L LEU LEU 120 118 H H 4 SEQCRD A R ARG ARG 121 119 H H 4 SEQCRD A M MET MET 122 120 H H 4 SEQCRD A L LEU LEU 123 121 H H 4 SEQCRD A Q GLN GLN 124 122 C T 45 SEQCRD A Q GLN GLN 125 123 C T 45 SEQCRD A K LYS LYS 126 124 C T 45 SEQCRD A R ARG ARG 127 125 H C 45 SEQCRD A W TRP TRP 128 126 H H 4 SEQCRD A D ASP ASP 129 127 H H 4 SEQCRD A E GLU GLU 130 128 H H 4 SEQCRD A A ALA ALA 131 129 H H 4 SEQCRD A A ALA ALA 132 130 H H 4 SEQCRD A V VAL VAL 133 131 H H 4 SEQCRD A N ASN ASN 134 132 H H 4 SEQCRD A L LEU LEU 135 133 H H 4 SEQCRD A A ALA ALA 136 134 C T 45 SEQCRD A K LYS LYS 137 135 C T 45 SEQCRD A S SER SER 138 136 H T 45 SEQCRD A R ARG ARG 139 137 H H 4 SEQCRD A W TRP TRP 140 138 H H 4 SEQCRD A Y TYR TYR 141 139 H H 4 SEQCRD A N ASN ASN 142 140 H H 4 SEQCRD A Q GLN GLN 143 141 H H 4 SEQCRD A T THR THR 144 142 H C 45 SEQCRD A P PRO PRO 145 143 H H 4 SEQCRD A N ASN ASN 146 144 H H 4 SEQCRD A R ARG ARG 147 145 H H 4 SEQCRD A A ALA ALA 148 146 H H 4 SEQCRD A K LYS LYS 149 147 H H 4 SEQCRD A R ARG ARG 150 148 H H 4 SEQCRD A V VAL VAL 151 149 H H 4 SEQCRD A I ILE ILE 152 150 H H 4 SEQCRD A T THR THR 153 151 H H 4 SEQCRD A T THR THR 154 152 H H 4 SEQCRD A F PHE PHE 155 153 H H 4 SEQCRD A R ARG ARG 156 154 H H 4 SEQCRD A T THR THR 157 155 H H 4 SEQCRD A G GLY GLY 158 156 H C 45 SEQCRD A T THR THR 159 157 C C 4 SEQCRD A W TRP TRP 160 158 H C 45 SEQCRD A D ASP ASP 161 159 H G 45 SEQCRD A A ALA ALA 162 160 H G 45 SEQCRD A Y TYR TYR 163 161 H G 45 SEQCRD A K LYS LYS 164 162 H C 45 SEQCRD A N ASN --- 165 - - - 367 SEQCRD A L LEU --- 166 - - - 367 SEQCRD B M MET MET 1 1 C C - SEQCRD B N ASN ASN 2 2 H C 5 SEQCRD B I ILE ILE 3 3 H H - SEQCRD B F PHE PHE 4 4 H H - SEQCRD B E GLU GLU 5 5 H H - SEQCRD B M MET MET 6 6 H H - SEQCRD B L LEU LEU 7 7 H H - SEQCRD B R ARG ARG 8 8 H H - SEQCRD B I ILE ILE 9 9 H H - SEQCRD B D ASP ASP 10 10 H H - SEQCRD B E GLU GLU 11 11 H H - SEQCRD B G GLY GLY 12 12 H C 5 SEQCRD B L LEU LEU 13 13 C C - SEQCRD B R ARG ARG 14 14 C C - SEQCRD B L LEU LEU 15 15 C C - SEQCRD B K LYS LYS 16 16 C B 5 SEQCRD B I ILE ILE 17 17 C C - SEQCRD B Y TYR TYR 18 18 E E - SEQCRD B K LYS LYS 19 19 E E - SEQCRD B D ASP ASP 20 20 C E 5 SEQCRD B T THR THR 21 21 C T 5 SEQCRD B E GLU GLU 22 22 C T 5 SEQCRD B G GLY GLY 23 23 C T 5 SEQCRD B Y TYR TYR 24 24 C E 5 SEQCRD B Y TYR TYR 25 25 E E - SEQCRD B T THR THR 26 26 E E - SEQCRD B I ILE ILE 27 27 C E 5 SEQCRD B G GLY GLY 28 28 C T 5 SEQCRD B I ILE ILE 29 29 C T 5 SEQCRD B G GLY GLY 30 30 C T 5 SEQCRD B H HIS HIS 31 31 C E 5 SEQCRD B L LEU LEU 32 32 C E 5 SEQCRD B L LEU LEU 33 33 C E 5 SEQCRD B T THR THR 34 34 C E 5 SEQCRD B K LYS LYS 35 35 C C - SEQCRD B S SER SER 36 36 C T 5 SEQCRD B P PRO PRO 37 37 C T 5 SEQCRD B S SER SER 38 38 C T 5 SEQCRD B L LEU LEU 39 39 C T 5 SEQCRD B N ASN ASN 40 40 H C 5 SEQCRD B A ALA ALA 41 41 H H - SEQCRD B A ALA ALA 42 42 H H - SEQCRD B K LYS LYS 43 43 H H - SEQCRD B S SER SER 44 44 H H - SEQCRD B A ALA ALA 45 44A H H 4 SEQCRD B A ALA ALA 46 44B H H 4 SEQCRD B E GLU GLU 47 45 H H 4 SEQCRD B L LEU LEU 48 46 H H 4 SEQCRD B D ASP ASP 49 47 H H 4 SEQCRD B K LYS LYS 50 48 H H 4 SEQCRD B A ALA ALA 51 49 H H 4 SEQCRD B I ILE ILE 52 50 H H 4 SEQCRD B G GLY GLY 53 51 C C 4 SEQCRD B R ARG ARG 54 52 C T 45 SEQCRD B N ASN ASN 55 53 C T 45 SEQCRD B T THR THR 56 54 C T 45 SEQCRD B N ASN ASN 57 55 C T 45 SEQCRD B G GLY GLY 58 56 C T 45 SEQCRD B V VAL VAL 59 57 C B 45 SEQCRD B I ILE ILE 60 58 C C 4 SEQCRD B T THR THR 61 59 H C 45 SEQCRD B K LYS LYS 62 60 H H 4 SEQCRD B D ASP ASP 63 61 H H 4 SEQCRD B E GLU GLU 64 62 H H 4 SEQCRD B A ALA ALA 65 63 H H 4 SEQCRD B E GLU GLU 66 64 H H 4 SEQCRD B K LYS LYS 67 65 H H 4 SEQCRD B L LEU LEU 68 66 H H 4 SEQCRD B F PHE PHE 69 67 H H 4 SEQCRD B N ASN ASN 70 68 H H 4 SEQCRD B Q GLN GLN 71 69 H H 4 SEQCRD B D ASP ASP 72 70 H H 4 SEQCRD B V VAL VAL 73 71 H H 4 SEQCRD B D ASP ASP 74 72 H H 4 SEQCRD B A ALA ALA 75 73 H H 4 SEQCRD B A ALA ALA 76 74 H H 4 SEQCRD B V VAL VAL 77 75 H H 4 SEQCRD B R ARG ARG 78 76 H H 4 SEQCRD B G GLY GLY 79 77 H H 4 SEQCRD B I ILE ILE 80 78 H H 4 SEQCRD B L LEU LEU 81 79 H H 4 SEQCRD B R ARG ARG 82 80 H H 4 SEQCRD B N ASN ASN 83 81 C C 4 SEQCRD B A ALA ALA 84 82 C C 4 SEQCRD B K LYS LYS 85 83 H H 4 SEQCRD B L LEU LEU 86 84 H H 4 SEQCRD B K LYS LYS 87 85 H H 4 SEQCRD B P PRO PRO 88 86 H H 4 SEQCRD B V VAL VAL 89 87 H H 4 SEQCRD B Y TYR TYR 90 88 H H 4 SEQCRD B D ASP ASP 91 89 H H 4 SEQCRD B S SER SER 92 90 H H 4 SEQCRD B L LEU LEU 93 91 H C 45 SEQCRD B D ASP ASP 94 92 C C 4 SEQCRD B A ALA ALA 95 93 C C 4 SEQCRD B V VAL VAL 96 94 H H 4 SEQCRD B R ARG ARG 97 95 H H 4 SEQCRD B R ARG ARG 98 96 H H 4 SEQCRD B A ALA ALA 99 97 H H 4 SEQCRD B A ALA ALA 100 98 H H 4 SEQCRD B L LEU LEU 101 99 H H 4 SEQCRD B I ILE ILE 102 100 H H 4 SEQCRD B N ASN ASN 103 101 H H 4 SEQCRD B M MET MET 104 102 H H 4 SEQCRD B V VAL VAL 105 103 H H 4 SEQCRD B F PHE PHE 106 104 H H 4 SEQCRD B Q GLN GLN 107 105 H H 4 SEQCRD B M MET MET 108 106 H H 4 SEQCRD B G GLY GLY 109 107 H C 45 SEQCRD B E GLU GLU 110 108 H H 4 SEQCRD B T THR THR 111 109 H H 4 SEQCRD B G GLY GLY 112 110 H H 4 SEQCRD B V VAL VAL 113 111 H H 4 SEQCRD B A ALA ALA 114 112 H H 4 SEQCRD B G GLY GLY 115 113 H H 4 SEQCRD B F PHE PHE 116 114 H T 45 SEQCRD B T THR THR 117 115 H H 4 SEQCRD B N ASN ASN 118 116 H H 4 SEQCRD B S SER SER 119 117 H H 4 SEQCRD B L LEU LEU 120 118 H H 4 SEQCRD B R ARG ARG 121 119 H H 4 SEQCRD B M MET MET 122 120 H H 4 SEQCRD B L LEU LEU 123 121 H H 4 SEQCRD B Q GLN GLN 124 122 H H 4 SEQCRD B Q GLN GLN 125 123 H H 4 SEQCRD B K LYS LYS 126 124 C C 4 SEQCRD B R ARG ARG 127 125 C C 4 SEQCRD B W TRP TRP 128 126 C C 4 SEQCRD B D ASP ASP 129 127 H H 4 SEQCRD B E GLU GLU 130 128 H H 4 SEQCRD B A ALA ALA 131 129 H H 4 SEQCRD B A ALA ALA 132 130 H H 4 SEQCRD B V VAL VAL 133 131 H H 4 SEQCRD B N ASN ASN 134 132 H H 4 SEQCRD B L LEU LEU 135 133 H H 4 SEQCRD B A ALA ALA 136 134 H H 4 SEQCRD B K LYS LYS 137 135 C C 4 SEQCRD B S SER SER 138 136 H C 45 SEQCRD B R ARG ARG 139 137 H H 4 SEQCRD B W TRP TRP 140 138 H H 4 SEQCRD B Y TYR TYR 141 139 H H 4 SEQCRD B N ASN ASN 142 140 H H 4 SEQCRD B Q GLN GLN 143 141 H H 4 SEQCRD B T THR THR 144 142 H C 45 SEQCRD B P PRO PRO 145 143 H H 4 SEQCRD B N ASN ASN 146 144 H H 4 SEQCRD B R ARG ARG 147 145 H H 4 SEQCRD B A ALA ALA 148 146 H H 4 SEQCRD B K LYS LYS 149 147 H H 4 SEQCRD B R ARG ARG 150 148 H H 4 SEQCRD B V VAL VAL 151 149 H H 4 SEQCRD B I ILE ILE 152 150 H H 4 SEQCRD B T THR THR 153 151 H H 4 SEQCRD B T THR THR 154 152 H H 4 SEQCRD B F PHE PHE 155 153 H H 4 SEQCRD B R ARG ARG 156 154 H H 4 SEQCRD B T THR THR 157 155 H H 4 SEQCRD B G GLY GLY 158 156 C C 4 SEQCRD B T THR THR 159 157 H C 45 SEQCRD B W TRP TRP 160 158 H C 45 SEQCRD B D ASP ASP 161 159 H G 45 SEQCRD B A ALA ALA 162 160 H G 45 SEQCRD B Y TYR TYR 163 161 H G 45 SEQCRD B K LYS LYS 164 162 H C 45 SEQCRD B N ASN --- 165 - - - 367 SEQCRD B L LEU --- 166 - - - 367 COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 4 No ATOM record S2CERR 4 240 SEQRES and ATOM residue numbers differ S2CERR 5 84 PDB and STRIDE secondary structures differ S2CERR 6 4 PDB secondary structure is absent S2CERR 7 4 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 2.8 PARAME R-factor 0.175 PARAME B-factor ? COMMNT COMMNT Reference database information: DATABA source: DATABA SWS: LYCV_BPT4 (P00720) COMMNT DATABA mutation: DATABA THR B 56 --> CYS 54 CONFLICT DATABA ALA B 99 --> CYS 97 CONFLICT DATABA ALA B 44 --> ? ? INSERTION DATABA THR A 56 --> CYS 54 CONFLICT DATABA ALA A 99 --> CYS 97 CONFLICT DATABA ALA A 44 --> ? ? INSERTION