HEADSC 1jqq COMMNT S2C correlation file created: Sat Aug 7 03:06:51 EDT 2004 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT www.fccc.edu/research/labs/dubrack/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD A I ILE ILE 1 1 C C - SEQCRD A S SER SER 2 2 C T 5 SEQCRD A E GLU GLU 3 3 C T 5 SEQCRD A F PHE PHE 4 4 C T 5 SEQCRD A G GLY GLY 5 5 C T 5 SEQCRD A S SER SER 6 6 C C - SEQCRD A E GLU GLU 7 7 C C - SEQCRD A P PRO PRO 8 8 C C - SEQCRD A I ILE ILE 9 9 C C - SEQCRD A D ASP ASP 10 10 C T 5 SEQCRD A P PRO PRO 11 11 C T 5 SEQCRD A S SER SER 12 12 C T 5 SEQCRD A K LYS LYS 13 13 C T 5 SEQCRD A L LEU LEU 14 14 C T 5 SEQCRD A E GLU GLU 15 15 E E - SEQCRD A F PHE PHE 16 16 E E - SEQCRD A A ALA ALA 17 17 E E - SEQCRD A R ARG ARG 18 18 E E - SEQCRD A A ALA ALA 19 19 E E - SEQCRD A L LEU LEU 20 20 C C - SEQCRD A Y TYR TYR 21 21 C C - SEQCRD A D ASP ASP 22 22 C B 5 SEQCRD A F PHE PHE 23 23 C B 5 SEQCRD A V VAL VAL 24 24 C C - SEQCRD A P PRO PRO 25 25 C T 5 SEQCRD A E GLU GLU 26 26 C T 5 SEQCRD A N ASN ASN 27 27 C T 5 SEQCRD A P PRO PRO 28 28 C T 5 SEQCRD A E GLU GLU 29 29 C T 5 SEQCRD A M MET MET 30 30 C T 5 SEQCRD A E GLU GLU 31 31 C B 5 SEQCRD A V VAL VAL 32 32 C C - SEQCRD A A ALA ALA 33 33 C C - SEQCRD A L LEU LEU 34 34 C B 5 SEQCRD A K LYS LYS 35 35 C T 5 SEQCRD A K LYS LYS 36 36 C T 5 SEQCRD A G GLY GLY 37 37 C T 5 SEQCRD A D ASP ASP 38 38 C E 5 SEQCRD A L LEU LEU 39 39 E E - SEQCRD A M MET MET 40 40 E E - SEQCRD A A ALA ALA 41 41 E E - SEQCRD A I ILE ILE 42 42 E E - SEQCRD A L LEU LEU 43 43 E E - SEQCRD A S SER SER 44 44 E E - SEQCRD A K LYS LYS 45 45 E C 5 SEQCRD A K LYS LYS 46 46 E B 5 SEQCRD A D ASP ASP 47 47 C T 5 SEQCRD A P PRO PRO 48 48 C T 5 SEQCRD A L LEU LEU 49 49 C T 5 SEQCRD A G GLY GLY 50 50 C T 5 SEQCRD A R ARG ARG 51 51 C C - SEQCRD A D ASP ASP 52 52 E B 5 SEQCRD A S SER SER 53 53 E C 5 SEQCRD A D ASP ASP 54 54 E C 5 SEQCRD A W TRP TRP 55 55 E E - SEQCRD A W TRP TRP 56 56 E E - SEQCRD A K LYS LYS 57 57 E E - SEQCRD A V VAL VAL 58 58 E E - SEQCRD A R ARG ARG 59 59 E E - SEQCRD A T THR THR 60 60 E E - SEQCRD A K LYS LYS 61 61 C T 5 SEQCRD A N ASN ASN 62 62 C T 5 SEQCRD A G GLY GLY 63 63 C T 5 SEQCRD A N ASN ASN 64 64 C C - SEQCRD A I ILE ILE 65 65 E E - SEQCRD A G GLY GLY 66 66 E E - SEQCRD A Y TYR TYR 67 67 E E - SEQCRD A I ILE ILE 68 68 E E - SEQCRD A P PRO PRO 69 69 E E - SEQCRD A Y TYR TYR 70 70 C G 5 SEQCRD A N ASN ASN 71 71 C G 5 SEQCRD A Y TYR TYR 72 72 C G 5 SEQCRD A I ILE ILE 73 73 E E - SEQCRD A E GLU GLU 74 74 E E - SEQCRD A I ILE ILE 75 75 E E - SEQCRD A I ILE ILE 76 76 C C - SEQCRD A K LYS LYS 77 77 C C - SEQCRD A R ARG ARG 78 78 C C - SEQCRD A R ARG ARG 79 79 C C - SEQCRD A K LYS --- 80 - - - 367 SEQCRD A K LYS --- 81 - - - 367 SEQCRD A I ILE --- 82 - - - 367 SEQCRD A E GLU --- 83 - - - 367 SEQCRD A H HIS --- 84 - - - 367 SEQCRD A V VAL --- 85 - - - 367 SEQCRD A D ASP --- 86 - - - 367 SEQCRD A D ASP --- 87 - - - 367 SEQCRD A E GLU --- 88 - - - 367 SEQCRD A T THR --- 89 - - - 367 SEQCRD A R ARG --- 90 - - - 367 SEQCRD A T THR --- 91 - - - 367 SEQCRD A H HIS --- 92 - - - 367 SEQCRD B I ILE ILE 1 1 C C - SEQCRD B S SER SER 2 2 C B 5 SEQCRD B E GLU GLU 3 3 C T 5 SEQCRD B F PHE PHE 4 4 C T 5 SEQCRD B G GLY GLY 5 5 C B 5 SEQCRD B S SER SER 6 6 C C - SEQCRD B E GLU GLU 7 7 C C - SEQCRD B P PRO PRO 8 8 C C - SEQCRD B I ILE ILE 9 9 C C - SEQCRD B D ASP ASP 10 10 H C 5 SEQCRD B P PRO PRO 11 11 H G 5 SEQCRD B S SER SER 12 12 H G 5 SEQCRD B K LYS LYS 13 13 H G 5 SEQCRD B L LEU LEU 14 14 H C 5 SEQCRD B E GLU GLU 15 15 E E - SEQCRD B F PHE PHE 16 16 E E - SEQCRD B A ALA ALA 17 17 E E - SEQCRD B R ARG ARG 18 18 E E - SEQCRD B A ALA ALA 19 19 E E - SEQCRD B L LEU LEU 20 20 C C - SEQCRD B Y TYR TYR 21 21 C C - SEQCRD B D ASP ASP 22 22 C B 5 SEQCRD B F PHE PHE 23 23 C B 5 SEQCRD B V VAL VAL 24 24 C C - SEQCRD B P PRO PRO 25 25 C T 5 SEQCRD B E GLU GLU 26 26 C T 5 SEQCRD B N ASN ASN 27 27 C T 5 SEQCRD B P PRO PRO 28 28 C T 5 SEQCRD B E GLU GLU 29 29 C T 5 SEQCRD B M MET MET 30 30 C T 5 SEQCRD B E GLU GLU 31 31 C B 5 SEQCRD B V VAL VAL 32 32 C C - SEQCRD B A ALA ALA 33 33 C C - SEQCRD B L LEU LEU 34 34 C B 5 SEQCRD B K LYS LYS 35 35 C T 5 SEQCRD B K LYS LYS 36 36 C T 5 SEQCRD B G GLY GLY 37 37 C T 5 SEQCRD B D ASP ASP 38 38 C E 5 SEQCRD B L LEU LEU 39 39 E E - SEQCRD B M MET MET 40 40 E E - SEQCRD B A ALA ALA 41 41 E E - SEQCRD B I ILE ILE 42 42 E E - SEQCRD B L LEU LEU 43 43 E E - SEQCRD B S SER SER 44 44 E E - SEQCRD B K LYS LYS 45 45 E C 5 SEQCRD B K LYS LYS 46 46 E B 5 SEQCRD B D ASP ASP 47 47 C T 5 SEQCRD B P PRO PRO 48 48 C T 5 SEQCRD B L LEU LEU 49 49 C T 5 SEQCRD B G GLY GLY 50 50 C T 5 SEQCRD B R ARG ARG 51 51 C C - SEQCRD B D ASP ASP 52 52 E B 5 SEQCRD B S SER SER 53 53 E T 5 SEQCRD B D ASP ASP 54 54 E T 5 SEQCRD B W TRP TRP 55 55 E E - SEQCRD B W TRP TRP 56 56 E E - SEQCRD B K LYS LYS 57 57 E E - SEQCRD B V VAL VAL 58 58 E E - SEQCRD B R ARG ARG 59 59 E E - SEQCRD B T THR THR 60 60 E E - SEQCRD B K LYS LYS 61 61 C T 5 SEQCRD B N ASN ASN 62 62 C T 5 SEQCRD B G GLY GLY 63 63 C T 5 SEQCRD B N ASN ASN 64 64 C C - SEQCRD B I ILE ILE 65 65 E E - SEQCRD B G GLY GLY 66 66 E E - SEQCRD B Y TYR TYR 67 67 E E - SEQCRD B I ILE ILE 68 68 E E - SEQCRD B P PRO PRO 69 69 E E - SEQCRD B Y TYR TYR 70 70 C G 5 SEQCRD B N ASN ASN 71 71 C G 5 SEQCRD B Y TYR TYR 72 72 C G 5 SEQCRD B I ILE ILE 73 73 E E - SEQCRD B E GLU GLU 74 74 E E - SEQCRD B I ILE ILE 75 75 E E - SEQCRD B I ILE ILE 76 76 C C - SEQCRD B K LYS LYS 77 77 C T 5 SEQCRD B R ARG ARG 78 78 C T 5 SEQCRD B R ARG ARG 79 79 C T 5 SEQCRD B K LYS LYS 80 80 C T 5 SEQCRD B K LYS LYS 81 81 C T 5 SEQCRD B I ILE ILE 82 82 C C - SEQCRD B E GLU --- 83 - - - 367 SEQCRD B H HIS --- 84 - - - 367 SEQCRD B V VAL --- 85 - - - 367 SEQCRD B D ASP --- 86 - - - 367 SEQCRD B D ASP --- 87 - - - 367 SEQCRD B E GLU --- 88 - - - 367 SEQCRD B T THR --- 89 - - - 367 SEQCRD B R ARG --- 90 - - - 367 SEQCRD B T THR --- 91 - - - 367 SEQCRD B H HIS --- 92 - - - 367 SEQCRD C I ILE --- 1 - - - 367 SEQCRD C S SER --- 2 - - - 367 SEQCRD C E GLU --- 3 - - - 367 SEQCRD C F PHE --- 4 - - - 367 SEQCRD C G GLY --- 5 - - - 367 SEQCRD C S SER SER 6 6 C C - SEQCRD C E GLU GLU 7 7 C C - SEQCRD C P PRO PRO 8 8 C C - SEQCRD C I ILE ILE 9 9 C C - SEQCRD C D ASP ASP 10 10 C T 5 SEQCRD C P PRO PRO 11 11 C T 5 SEQCRD C S SER SER 12 12 C T 5 SEQCRD C K LYS LYS 13 13 C T 5 SEQCRD C L LEU LEU 14 14 C T 5 SEQCRD C E GLU GLU 15 15 E E - SEQCRD C F PHE PHE 16 16 E E - SEQCRD C A ALA ALA 17 17 E E - SEQCRD C R ARG ARG 18 18 E E - SEQCRD C A ALA ALA 19 19 E E - SEQCRD C L LEU LEU 20 20 C C - SEQCRD C Y TYR TYR 21 21 C C - SEQCRD C D ASP ASP 22 22 C C - SEQCRD C F PHE PHE 23 23 C B 5 SEQCRD C V VAL VAL 24 24 C C - SEQCRD C P PRO PRO 25 25 C C - SEQCRD C E GLU GLU 26 26 C T 5 SEQCRD C N ASN --- 27 - - - 367 SEQCRD C P PRO --- 28 - - - 367 SEQCRD C E GLU GLU 29 29 C T 5 SEQCRD C M MET MET 30 30 C T 5 SEQCRD C E GLU GLU 31 31 C B 5 SEQCRD C V VAL VAL 32 32 C C - SEQCRD C A ALA ALA 33 33 C C - SEQCRD C L LEU LEU 34 34 C B 5 SEQCRD C K LYS LYS 35 35 C T 5 SEQCRD C K LYS LYS 36 36 C T 5 SEQCRD C G GLY GLY 37 37 C T 5 SEQCRD C D ASP ASP 38 38 C E 5 SEQCRD C L LEU LEU 39 39 E E - SEQCRD C M MET MET 40 40 E E - SEQCRD C A ALA ALA 41 41 E E - SEQCRD C I ILE ILE 42 42 E E - SEQCRD C L LEU LEU 43 43 E E - SEQCRD C S SER SER 44 44 E E - SEQCRD C K LYS LYS 45 45 E C 5 SEQCRD C K LYS LYS 46 46 E B 5 SEQCRD C D ASP ASP 47 47 C T 5 SEQCRD C P PRO PRO 48 48 C T 5 SEQCRD C L LEU LEU 49 49 C T 5 SEQCRD C G GLY GLY 50 50 C T 5 SEQCRD C R ARG ARG 51 51 C C - SEQCRD C D ASP ASP 52 52 E B 5 SEQCRD C S SER SER 53 53 E T 5 SEQCRD C D ASP ASP 54 54 E T 5 SEQCRD C W TRP TRP 55 55 E E - SEQCRD C W TRP TRP 56 56 E E - SEQCRD C K LYS LYS 57 57 E E - SEQCRD C V VAL VAL 58 58 E E - SEQCRD C R ARG ARG 59 59 E E - SEQCRD C T THR THR 60 60 E T 5 SEQCRD C K LYS LYS 61 61 C T 5 SEQCRD C N ASN ASN 62 62 C T 5 SEQCRD C G GLY GLY 63 63 C T 5 SEQCRD C N ASN ASN 64 64 C C - SEQCRD C I ILE ILE 65 65 E E - SEQCRD C G GLY GLY 66 66 E E - SEQCRD C Y TYR TYR 67 67 E E - SEQCRD C I ILE ILE 68 68 E E - SEQCRD C P PRO PRO 69 69 E E - SEQCRD C Y TYR TYR 70 70 C G 5 SEQCRD C N ASN ASN 71 71 C G 5 SEQCRD C Y TYR TYR 72 72 C G 5 SEQCRD C I ILE ILE 73 73 E E - SEQCRD C E GLU GLU 74 74 E E - SEQCRD C I ILE ILE 75 75 E E - SEQCRD C I ILE ILE 76 76 C C - SEQCRD C K LYS LYS 77 77 C C - SEQCRD C R ARG --- 78 - - - 367 SEQCRD C R ARG --- 79 - - - 367 SEQCRD C K LYS --- 80 - - - 367 SEQCRD C K LYS --- 81 - - - 367 SEQCRD C I ILE --- 82 - - - 367 SEQCRD C E GLU --- 83 - - - 367 SEQCRD C H HIS --- 84 - - - 367 SEQCRD C V VAL --- 85 - - - 367 SEQCRD C D ASP --- 86 - - - 367 SEQCRD C D ASP --- 87 - - - 367 SEQCRD C E GLU --- 88 - - - 367 SEQCRD C T THR --- 89 - - - 367 SEQCRD C R ARG --- 90 - - - 367 SEQCRD C T THR --- 91 - - - 367 SEQCRD C H HIS --- 92 - - - 367 SEQCRD D I ILE --- 1 - - - 367 SEQCRD D S SER --- 2 - - - 367 SEQCRD D E GLU --- 3 - - - 367 SEQCRD D F PHE --- 4 - - - 367 SEQCRD D G GLY --- 5 - - - 367 SEQCRD D S SER SER 6 6 C C - SEQCRD D E GLU GLU 7 7 C C - SEQCRD D P PRO PRO 8 8 C C - SEQCRD D I ILE ILE 9 9 C C - SEQCRD D D ASP ASP 10 10 C T 5 SEQCRD D P PRO PRO 11 11 C T 5 SEQCRD D S SER SER 12 12 C T 5 SEQCRD D K LYS LYS 13 13 C T 5 SEQCRD D L LEU LEU 14 14 C T 5 SEQCRD D E GLU GLU 15 15 C E 5 SEQCRD D F PHE PHE 16 16 E E - SEQCRD D A ALA ALA 17 17 E E - SEQCRD D R ARG ARG 18 18 E E - SEQCRD D A ALA ALA 19 19 E E - SEQCRD D L LEU LEU 20 20 C C - SEQCRD D Y TYR TYR 21 21 C C - SEQCRD D D ASP ASP 22 22 C C - SEQCRD D F PHE PHE 23 23 C B 5 SEQCRD D V VAL VAL 24 24 C C - SEQCRD D P PRO PRO 25 25 C T 5 SEQCRD D E GLU GLU 26 26 C T 5 SEQCRD D N ASN ASN 27 27 C T 5 SEQCRD D P PRO PRO 28 28 C T 5 SEQCRD D E GLU GLU 29 29 C T 5 SEQCRD D M MET MET 30 30 C T 5 SEQCRD D E GLU GLU 31 31 C B 5 SEQCRD D V VAL VAL 32 32 C C - SEQCRD D A ALA ALA 33 33 C C - SEQCRD D L LEU LEU 34 34 C B 5 SEQCRD D K LYS LYS 35 35 C T 5 SEQCRD D K LYS LYS 36 36 C T 5 SEQCRD D G GLY GLY 37 37 C T 5 SEQCRD D D ASP ASP 38 38 C E 5 SEQCRD D L LEU LEU 39 39 E E - SEQCRD D M MET MET 40 40 E E - SEQCRD D A ALA ALA 41 41 E E - SEQCRD D I ILE ILE 42 42 E E - SEQCRD D L LEU LEU 43 43 E E - SEQCRD D S SER SER 44 44 E E - SEQCRD D K LYS LYS 45 45 E C 5 SEQCRD D K LYS LYS 46 46 E B 5 SEQCRD D D ASP ASP 47 47 C T 5 SEQCRD D P PRO PRO 48 48 C T 5 SEQCRD D L LEU LEU 49 49 C T 5 SEQCRD D G GLY GLY 50 50 C T 5 SEQCRD D R ARG ARG 51 51 C C - SEQCRD D D ASP ASP 52 52 E B 5 SEQCRD D S SER SER 53 53 E C 5 SEQCRD D D ASP ASP 54 54 E C 5 SEQCRD D W TRP TRP 55 55 E E - SEQCRD D W TRP TRP 56 56 E E - SEQCRD D K LYS LYS 57 57 E E - SEQCRD D V VAL VAL 58 58 E E - SEQCRD D R ARG ARG 59 59 E E - SEQCRD D T THR THR 60 60 E T 5 SEQCRD D K LYS LYS 61 61 C T 5 SEQCRD D N ASN ASN 62 62 C T 5 SEQCRD D G GLY GLY 63 63 C T 5 SEQCRD D N ASN ASN 64 64 C C - SEQCRD D I ILE ILE 65 65 E E - SEQCRD D G GLY GLY 66 66 E E - SEQCRD D Y TYR TYR 67 67 E E - SEQCRD D I ILE ILE 68 68 E E - SEQCRD D P PRO PRO 69 69 E E - SEQCRD D Y TYR TYR 70 70 C G 5 SEQCRD D N ASN ASN 71 71 C G 5 SEQCRD D Y TYR TYR 72 72 C G 5 SEQCRD D I ILE ILE 73 73 E E - SEQCRD D E GLU GLU 74 74 E E - SEQCRD D I ILE ILE 75 75 E E - SEQCRD D I ILE ILE 76 76 C C - SEQCRD D K LYS LYS 77 77 C C - SEQCRD D R ARG ARG 78 78 C C - SEQCRD D R ARG --- 79 - - - 367 SEQCRD D K LYS --- 80 - - - 367 SEQCRD D K LYS --- 81 - - - 367 SEQCRD D I ILE --- 82 - - - 367 SEQCRD D E GLU --- 83 - - - 367 SEQCRD D H HIS --- 84 - - - 367 SEQCRD D V VAL --- 85 - - - 367 SEQCRD D D ASP --- 86 - - - 367 SEQCRD D D ASP --- 87 - - - 367 SEQCRD D E GLU --- 88 - - - 367 SEQCRD D T THR --- 89 - - - 367 SEQCRD D R ARG --- 90 - - - 367 SEQCRD D T THR --- 91 - - - 367 SEQCRD D H HIS --- 92 - - - 367 COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 64 No ATOM record S2CERR 4 0 SEQRES and ATOM residue numbers differ S2CERR 5 147 PDB and STRIDE secondary structures differ S2CERR 6 64 PDB secondary structure is absent S2CERR 7 64 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 2.65 PARAME R-factor ? PARAME B-factor 45.3929 COMMNT COMMNT Reference database information: DATABA source: DATABA SWS: PEXD_YEAST (P80667) COMMNT DATABA mutation: DATABA ILE B 1 --> ? ? 'CLONING ARTIFACT' DATABA GLU B 3 --> ? ? 'CLONING ARTIFACT' DATABA SER D 2 --> ? ? 'CLONING ARTIFACT' DATABA PHE A 4 --> ? ? 'CLONING ARTIFACT' DATABA ILE A 1 --> ? ? 'CLONING ARTIFACT' DATABA SER C 2 --> ? ? 'CLONING ARTIFACT' DATABA GLU A 3 --> ? ? 'CLONING ARTIFACT' DATABA SER B 2 --> ? ? 'CLONING ARTIFACT' DATABA PHE D 4 --> ? ? 'CLONING ARTIFACT' DATABA ILE D 1 --> ? ? 'CLONING ARTIFACT' DATABA GLU D 3 --> ? ? 'CLONING ARTIFACT' DATABA SER A 2 --> ? ? 'CLONING ARTIFACT' DATABA PHE C 4 --> ? ? 'CLONING ARTIFACT' DATABA ILE C 1 --> ? ? 'CLONING ARTIFACT' DATABA GLU C 3 --> ? ? 'CLONING ARTIFACT' DATABA PHE B 4 --> ? ? 'CLONING ARTIFACT'